EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0086620	RRM_1	PF00076.22	2.2e-63	1	3
MGP_C3HHeJ_P0086620	RRM_1	PF00076.22	2.2e-63	2	3
MGP_C3HHeJ_P0086620	RRM_1	PF00076.22	2.2e-63	3	3
MGP_C3HHeJ_P0086624	RRM_1	PF00076.22	2.2e-63	1	3
MGP_C3HHeJ_P0086624	RRM_1	PF00076.22	2.2e-63	2	3
MGP_C3HHeJ_P0086624	RRM_1	PF00076.22	2.2e-63	3	3
MGP_C3HHeJ_P0086617	RRM_1	PF00076.22	3.1e-60	1	3
MGP_C3HHeJ_P0086617	RRM_1	PF00076.22	3.1e-60	2	3
MGP_C3HHeJ_P0086617	RRM_1	PF00076.22	3.1e-60	3	3
MGP_C3HHeJ_P0086619	RRM_1	PF00076.22	7.6e-51	1	3
MGP_C3HHeJ_P0086619	RRM_1	PF00076.22	7.6e-51	2	3
MGP_C3HHeJ_P0086619	RRM_1	PF00076.22	7.6e-51	3	3
MGP_C3HHeJ_P0086625	RRM_1	PF00076.22	1.8e-26	1	2
MGP_C3HHeJ_P0086625	RRM_1	PF00076.22	1.8e-26	2	2
MGP_C3HHeJ_P0086623	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0086628	-	804	-	MGP_C3HHeJ_P0086628	140 (aa)	-	-
MGP_C3HHeJ_T0086621	-	953	-	MGP_C3HHeJ_P0086621	106 (aa)	-	-
MGP_C3HHeJ_T0086617	-	4456	XM_006507570	MGP_C3HHeJ_P0086617	392 (aa)	XP_006507633	P70318
MGP_C3HHeJ_T0086630	-	674	-	-	- (aa)	-	-
MGP_C3HHeJ_T0086622	-	2319	-	MGP_C3HHeJ_P0086622	135 (aa)	-	-
MGP_C3HHeJ_T0086623	-	562	-	MGP_C3HHeJ_P0086623	107 (aa)	-	-
MGP_C3HHeJ_T0086619	-	2835	-	MGP_C3HHeJ_P0086619	336 (aa)	-	-
MGP_C3HHeJ_T0086618	-	4271	-	-	- (aa)	-	-
MGP_C3HHeJ_T0086626	-	784	-	MGP_C3HHeJ_P0086626	41 (aa)	-	-
MGP_C3HHeJ_T0086627	-	560	-	-	- (aa)	-	-
MGP_C3HHeJ_T0086624	-	1580	-	MGP_C3HHeJ_P0086624	375 (aa)	-	-
MGP_C3HHeJ_T0086625	-	1344	-	MGP_C3HHeJ_P0086625	244 (aa)	-	-
MGP_C3HHeJ_T0086629	-	1808	-	-	- (aa)	-	-
MGP_C3HHeJ_T0086620	-	2033	-	MGP_C3HHeJ_P0086620	375 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0032780	Tial1	69	31.469	MGP_C3HHeJ_G0029664	Msi1	56	41.379
MGP_C3HHeJ_G0032780	Tial1	62	32.184	MGP_C3HHeJ_G0022457	Ncbp2	71	33.333
MGP_C3HHeJ_G0032780	Tial1	92	32.500	MGP_C3HHeJ_G0024102	Pabpc2	50	35.036
MGP_C3HHeJ_G0032780	Tial1	100	87.440	MGP_C3HHeJ_G0030756	Tia1	97	86.992
MGP_C3HHeJ_G0032780	Tial1	73	37.179	MGP_C3HHeJ_G0034155	Elavl3	90	37.179
MGP_C3HHeJ_G0032780	Tial1	65	31.481	MGP_C3HHeJ_G0025065	Celf2	61	34.177
MGP_C3HHeJ_G0032780	Tial1	81	31.111	MGP_C3HHeJ_G0019219	Rbfox3	53	31.868
MGP_C3HHeJ_G0032780	Tial1	81	37.333	MGP_C3HHeJ_G0027259	Celf3	70	34.091
MGP_C3HHeJ_G0032780	Tial1	64	31.461	MGP_C3HHeJ_G0035420	Rbmx	90	32.258
MGP_C3HHeJ_G0032780	Tial1	73	35.897	MGP_C3HHeJ_G0028272	Elavl4	88	35.897
MGP_C3HHeJ_G0032780	Tial1	73	32.000	MGP_C3HHeJ_G0027046	Rbm46	52	30.000
MGP_C3HHeJ_G0032780	Tial1	94	31.783	MGP_C3HHeJ_G0022870	Pabpc6	56	34.014
MGP_C3HHeJ_G0032780	Tial1	99	31.618	MGP_C3HHeJ_G0026905	Pabpc4l	94	33.333
MGP_C3HHeJ_G0032780	Tial1	72	34.615	MGP_C3HHeJ_G0028138	Elavl2	93	34.615
MGP_C3HHeJ_G0032780	Tial1	67	40.244	MGP_C3HHeJ_G0017249	Cirbp	85	40.244
MGP_C3HHeJ_G0032780	Tial1	67	30.769	MGP_C3HHeJ_G0033028	Elavl1	95	30.769
MGP_C3HHeJ_G0032780	Tial1	94	31.008	MGP_C3HHeJ_G0021538	Pabpc1	56	34.783
MGP_C3HHeJ_G0032780	Tial1	53	32.143	MGP_C3HHeJ_G0034585	Celf6	54	31.818
MGP_C3HHeJ_G0032780	Tial1	94	30.233	MGP_C3HHeJ_G0028436	Pabpc4	100	33.333
MGP_C3HHeJ_G0032780	Tial1	73	33.019	MGP_C3HHeJ_G0028564	Trnau1ap	60	32.386