EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0033241 (Gene tree)
Gene ID: -
Gene Symbol: Cnot7
Alias: AU022737|CAF-1|Caf1|Pop2
Full Name: CCR4-NOT transcription complex%2C subunit 7
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 23980 bases
Position: chr8:39307580-39331559
Accession: 1298230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0088237	CAF1	PF04857.20	3.5e-22	1	2
MGP_C3HHeJ_P0088237	CAF1	PF04857.20	3.5e-22	2	2
MGP_C3HHeJ_P0088238	CAF1	PF04857.20	3.5e-22	1	2
MGP_C3HHeJ_P0088238	CAF1	PF04857.20	3.5e-22	2	2
MGP_C3HHeJ_P0088241	CAF1	PF04857.20	3.5e-22	1	2
MGP_C3HHeJ_P0088241	CAF1	PF04857.20	3.5e-22	2	2
MGP_C3HHeJ_P0088240	CAF1	PF04857.20	6.1e-19	1	2
MGP_C3HHeJ_P0088240	CAF1	PF04857.20	6.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0088237	-	2616	XM_006509306	MGP_C3HHeJ_P0088237	285 (aa)	XP_006509369	Q60809
MGP_C3HHeJ_T0088239	-	3813	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088238	-	2542	-	MGP_C3HHeJ_P0088238	285 (aa)	-	-
MGP_C3HHeJ_T0088246	-	726	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088247	-	483	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088245	-	312	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088242	-	679	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088243	-	840	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088240	-	2462	-	MGP_C3HHeJ_P0088240	248 (aa)	-	-
MGP_C3HHeJ_T0088241	-	2983	-	MGP_C3HHeJ_P0088241	285 (aa)	-	-
MGP_C3HHeJ_T0088248	-	406	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0033241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0033241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0033241	Cnot7	99	76.596	MGP_C3HHeJ_G0018094	Cnot8	97	76.596