EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0033388 (Gene tree)
Gene ID: -
Gene Symbol: Ddx49
Alias: R27090_2
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 10038 bases
Position: chr8:70258641-70268678
Accession: 2136689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0088762	ResIII	PF04851.15	4.2e-06	1	1
MGP_C3HHeJ_P0088762	DEAD	PF00270.29	7.4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0088765	-	1104	-	MGP_C3HHeJ_P0088765	354 (aa)	-	-
MGP_C3HHeJ_T0088764	-	599	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088767	-	305	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088766	-	1447	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088763	-	2163	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088762	-	2137	-	MGP_C3HHeJ_P0088762	480 (aa)	-	Q4FZF3

Gene Model

Click here to download MGP_C3HHeJ_G0033388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0033388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0033388	Ddx49	63	30.493	MGP_C3HHeJ_G0030839	Gm8994	82	30.493
MGP_C3HHeJ_G0033388	Ddx49	92	33.238	MGP_C3HHeJ_G0029793	Ddx55	58	33.056
MGP_C3HHeJ_G0033388	Ddx49	95	33.138	MGP_C3HHeJ_G0016310	Ddx59	58	32.609
MGP_C3HHeJ_G0033388	Ddx49	94	32.239	MGP_C3HHeJ_G0022409	Eif4a2	92	32.546
MGP_C3HHeJ_G0033388	Ddx49	95	31.953	MGP_C3HHeJ_G0019227	Eif4a3	91	32.190
MGP_C3HHeJ_G0033388	Ddx49	97	33.333	MGP_C3HHeJ_G0033525	Ddx39	87	33.156
MGP_C3HHeJ_G0033388	Ddx49	63	30.493	MGP_C3HHeJ_G0030840	Gm5580	82	30.493
MGP_C3HHeJ_G0033388	Ddx49	90	37.500	MGP_C3HHeJ_G0016682	D1Pas1	55	36.316
MGP_C3HHeJ_G0033388	Ddx49	76	30.081	MGP_C3HHeJ_G0018617	Ddx52	61	30.081
MGP_C3HHeJ_G0033388	Ddx49	97	35.311	MGP_C3HHeJ_G0019064	Ddx5	76	34.062
MGP_C3HHeJ_G0033388	Ddx49	96	40.909	MGP_C3HHeJ_G0019353	Ddx1	63	40.909
MGP_C3HHeJ_G0033388	Ddx49	93	34.897	MGP_C3HHeJ_G0034749	Ddx43	60	34.913
MGP_C3HHeJ_G0033388	Ddx49	97	49.271	MGP_C3HHeJ_G0031116	Ddx47	95	45.824
MGP_C3HHeJ_G0033388	Ddx49	92	37.764	MGP_C3HHeJ_G0016181	Ddx18	56	35.884
MGP_C3HHeJ_G0033388	Ddx49	59	33.175	MGP_C3HHeJ_G0017772	Ddx56	94	32.627
MGP_C3HHeJ_G0033388	Ddx49	90	36.919	MGP_C3HHeJ_G0035258	Ddx3x	55	35.789
MGP_C3HHeJ_G0033388	Ddx49	97	38.177	MGP_C3HHeJ_G0026624	Ddx27	59	33.696
MGP_C3HHeJ_G0033388	Ddx49	95	33.616	MGP_C3HHeJ_G0020677	Ddx4	52	33.687
MGP_C3HHeJ_G0033388	Ddx49	93	30.175	MGP_C3HHeJ_G0029587	Ddx51	71	30.573
MGP_C3HHeJ_G0033388	Ddx49	96	33.333	MGP_C3HHeJ_G0020351	Ddx41	62	32.921
MGP_C3HHeJ_G0033388	Ddx49	97	33.046	MGP_C3HHeJ_G0023360	Ddx39b	86	32.891
MGP_C3HHeJ_G0033388	Ddx49	92	32.402	MGP_C3HHeJ_G0033760	Ddx28	68	31.649
MGP_C3HHeJ_G0033388	Ddx49	98	32.741	MGP_C3HHeJ_G0025267	Ddx31	63	31.136
MGP_C3HHeJ_G0033388	Ddx49	91	39.521	MGP_C3HHeJ_G0021815	Ddx17	56	37.903