EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0033407 (Gene tree)
Gene ID: -
Gene Symbol: Lsm4
Alias: -
Full Name: LSM4 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 7313 bases
Position: chr8:70659763-70667075
Accession: 1354692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0088837	LSM	PF01423.22	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0088837	-	925	XM_006509706	MGP_C3HHeJ_P0088837	138 (aa)	XP_006509769	D3YTP8
MGP_C3HHeJ_T0088839	-	375	-	-	- (aa)	-	-
MGP_C3HHeJ_T0088838	-	163	-	MGP_C3HHeJ_P0088838	46 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0033407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0033407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0033407	Lsm4	70	35.644	MGP_C3HHeJ_G0023331	Lsm2	92	34.831
MGP_C3HHeJ_G0033407	Lsm4	65	31.522	MGP_C3HHeJ_G0017117	Snrpd3	56	34.722