EuRBPDB

Description

Ensembl ID: MGP_C3HHeJ_G0033612 (Gene tree)
Gene ID: -
Gene Symbol: Chd9
Alias: 1810014J18Rik|9030205D12Rik|A330063D19Rik|AD013|Kiaa0308|PRIC320|Pric320|mKIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 243926 bases
Position: chr8:91607016-91850941
Accession: 1924001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0089503	ResIII	PF04851.15	4.7e-06	1	1
MGP_C3HHeJ_P0089502	ResIII	PF04851.15	4.7e-06	1	1
MGP_C3HHeJ_P0089502	BRK	PF07533.16	3e-30	1	2
MGP_C3HHeJ_P0089502	BRK	PF07533.16	3e-30	2	2
MGP_C3HHeJ_P0089503	BRK	PF07533.16	3.1e-30	1	2
MGP_C3HHeJ_P0089503	BRK	PF07533.16	3.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0089502	-	11517	XM_006530568	MGP_C3HHeJ_P0089502	2869 (aa)	XP_006530631	Q8BYH8
MGP_C3HHeJ_T0089503	-	11565	-	MGP_C3HHeJ_P0089503	2885 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0033612	Chd9	74	61.717	MGP_C3HHeJ_G0026527	Chd6	84	71.227
MGP_C3HHeJ_G0033612	Chd9	83	69.649	MGP_C3HHeJ_G0027740	Chd7	94	54.400