EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0033911 (Gene tree)
Gene ID: -
Gene Symbol: Snai3
Alias: AI643946|Smuc|Snail-related gene from muscle cells|Zfp293
Full Name: snail family zinc finger 3
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 6504 bases
Position: chr8:124995698-125002201
Accession: 1353563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0090385	zf-C2H2	PF00096.26	3.1e-24	1	4
MGP_C3HHeJ_P0090385	zf-C2H2	PF00096.26	3.1e-24	2	4
MGP_C3HHeJ_P0090385	zf-C2H2	PF00096.26	3.1e-24	3	4
MGP_C3HHeJ_P0090385	zf-C2H2	PF00096.26	3.1e-24	4	4
MGP_C3HHeJ_P0090385	zf-met	PF12874.7	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0090385	-	1589	XM_006531074	MGP_C3HHeJ_P0090385	287 (aa)	XP_006531137	Q9QY31

Gene Model

Click here to download MGP_C3HHeJ_G0033911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0033911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0033911	Snai3	67	47.297	MGP_C3HHeJ_G0024336	Zfp236	57	36.242
MGP_C3HHeJ_G0033911	Snai3	55	42.336	MGP_C3HHeJ_G0030900	Prdm5	68	48.544
MGP_C3HHeJ_G0033911	Snai3	99	47.099	MGP_C3HHeJ_G0022281	Snai2	99	46.599