EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0034162 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 13535 bases
Position: chr9:19774888-19788422
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0091076	zf-C2H2	PF00096.26	6.1e-50	1	9
MGP_C3HHeJ_P0091076	zf-C2H2	PF00096.26	6.1e-50	2	9
MGP_C3HHeJ_P0091076	zf-C2H2	PF00096.26	6.1e-50	3	9
MGP_C3HHeJ_P0091076	zf-C2H2	PF00096.26	6.1e-50	4	9
MGP_C3HHeJ_P0091076	zf-C2H2	PF00096.26	6.1e-50	5	9
MGP_C3HHeJ_P0091076	zf-C2H2	PF00096.26	6.1e-50	6	9
MGP_C3HHeJ_P0091076	zf-C2H2	PF00096.26	6.1e-50	7	9
MGP_C3HHeJ_P0091076	zf-C2H2	PF00096.26	6.1e-50	8	9
MGP_C3HHeJ_P0091076	zf-C2H2	PF00096.26	6.1e-50	9	9
MGP_C3HHeJ_P0091075	zf-C2H2	PF00096.26	6.4e-50	1	9
MGP_C3HHeJ_P0091075	zf-C2H2	PF00096.26	6.4e-50	2	9
MGP_C3HHeJ_P0091075	zf-C2H2	PF00096.26	6.4e-50	3	9
MGP_C3HHeJ_P0091075	zf-C2H2	PF00096.26	6.4e-50	4	9
MGP_C3HHeJ_P0091075	zf-C2H2	PF00096.26	6.4e-50	5	9
MGP_C3HHeJ_P0091075	zf-C2H2	PF00096.26	6.4e-50	6	9
MGP_C3HHeJ_P0091075	zf-C2H2	PF00096.26	6.4e-50	7	9
MGP_C3HHeJ_P0091075	zf-C2H2	PF00096.26	6.4e-50	8	9
MGP_C3HHeJ_P0091075	zf-C2H2	PF00096.26	6.4e-50	9	9
MGP_C3HHeJ_P0091076	zf-met	PF12874.7	8.9e-05	1	1
MGP_C3HHeJ_P0091075	zf-met	PF12874.7	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0091076	-	1395	-	MGP_C3HHeJ_P0091076	464 (aa)	-	-
MGP_C3HHeJ_T0091075	-	2958	-	MGP_C3HHeJ_P0091075	465 (aa)	-	F7APL9

Gene Model

Click here to download MGP_C3HHeJ_G0034162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0034162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0034162	Zfp872	86	44.758	MGP_C3HHeJ_G0032733	-	78	45.570
MGP_C3HHeJ_G0034162	Zfp872	96	53.982	MGP_C3HHeJ_G0030551	Zfp637	88	53.982
MGP_C3HHeJ_G0034162	Zfp872	99	47.684	MGP_C3HHeJ_G0020463	Zfp748	99	48.459
MGP_C3HHeJ_G0034162	Zfp872	80	44.330	MGP_C3HHeJ_G0029207	Zbtb49	78	44.444
MGP_C3HHeJ_G0034162	Zfp872	84	48.162	MGP_C3HHeJ_G0032730	Zfp768	51	47.426
MGP_C3HHeJ_G0034162	Zfp872	99	40.755	MGP_C3HHeJ_G0032732	E430018J23Rik	86	41.045
MGP_C3HHeJ_G0034162	Zfp872	99	40.530	MGP_C3HHeJ_G0030900	Prdm5	82	40.076
MGP_C3HHeJ_G0034162	Zfp872	86	53.608	MGP_C3HHeJ_G0031693	Zfp420	99	54.233
MGP_C3HHeJ_G0034162	Zfp872	99	44.904	MGP_C3HHeJ_G0022976	Zfp945	95	44.904
MGP_C3HHeJ_G0034162	Zfp872	87	47.619	MGP_C3HHeJ_G0031632	Zfp974	89	48.905
MGP_C3HHeJ_G0034162	Zfp872	83	41.964	MGP_C3HHeJ_G0028746	Zbtb17	56	42.638
MGP_C3HHeJ_G0034162	Zfp872	99	53.333	MGP_C3HHeJ_G0018152	Zfp867	95	53.407
MGP_C3HHeJ_G0034162	Zfp872	99	39.823	MGP_C3HHeJ_G0026610	Zfp334	99	41.827
MGP_C3HHeJ_G0034162	Zfp872	99	45.552	MGP_C3HHeJ_G0031528	Zfp94	96	45.552
MGP_C3HHeJ_G0034162	Zfp872	88	52.280	MGP_C3HHeJ_G0031521	Zfp112	60	52.665
MGP_C3HHeJ_G0034162	Zfp872	94	48.159	MGP_C3HHeJ_G0031522	Zfp235	75	48.159
MGP_C3HHeJ_G0034162	Zfp872	94	58.140	MGP_C3HHeJ_G0031527	Zfp61	63	58.140
MGP_C3HHeJ_G0034162	Zfp872	86	49.333	MGP_C3HHeJ_G0031526	Zfp108	68	49.333
MGP_C3HHeJ_G0034162	Zfp872	99	45.113	MGP_C3HHeJ_G0033828	Zfp1	98	45.113
MGP_C3HHeJ_G0034162	Zfp872	80	34.050	MGP_C3HHeJ_G0026648	Zfp64	71	34.082
MGP_C3HHeJ_G0034162	Zfp872	100	50.368	MGP_C3HHeJ_G0020445	Rslcan18	80	47.959
MGP_C3HHeJ_G0034162	Zfp872	99	48.447	MGP_C3HHeJ_G0020446	Zfp759	99	46.000
MGP_C3HHeJ_G0034162	Zfp872	87	38.342	MGP_C3HHeJ_G0018742	Zfp652	69	36.054
MGP_C3HHeJ_G0034162	Zfp872	78	44.030	MGP_C3HHeJ_G0029542	Gfi1	100	44.030
MGP_C3HHeJ_G0034162	Zfp872	94	40.800	MGP_C3HHeJ_G0024336	Zfp236	62	44.318
MGP_C3HHeJ_G0034162	Zfp872	82	34.140	MGP_C3HHeJ_G0033668	Zfp319	90	34.722
MGP_C3HHeJ_G0034162	Zfp872	80	35.266	MGP_C3HHeJ_G0031282	Zfp784	77	34.762
MGP_C3HHeJ_G0034162	Zfp872	99	53.571	MGP_C3HHeJ_G0021752	Zfp251	68	54.027
MGP_C3HHeJ_G0034162	Zfp872	97	48.780	MGP_C3HHeJ_G0031815	-	60	47.273
MGP_C3HHeJ_G0034162	Zfp872	99	45.773	MGP_C3HHeJ_G0022953	Zfp677	98	45.773
MGP_C3HHeJ_G0034162	Zfp872	99	43.702	MGP_C3HHeJ_G0022955	Zfp51	94	44.444
MGP_C3HHeJ_G0034162	Zfp872	84	44.156	MGP_C3HHeJ_G0031279	Zfp865	78	35.776
MGP_C3HHeJ_G0034162	Zfp872	99	50.284	MGP_C3HHeJ_G0033454	Zfp882	97	44.991
MGP_C3HHeJ_G0034162	Zfp872	99	48.746	MGP_C3HHeJ_G0026182	Zfp661	94	48.507
MGP_C3HHeJ_G0034162	Zfp872	96	33.159	MGP_C3HHeJ_G0030394	Repin1	98	33.159
MGP_C3HHeJ_G0034162	Zfp872	97	39.935	MGP_C3HHeJ_G0022983	Zscan10	80	39.935
MGP_C3HHeJ_G0034162	Zfp872	95	51.220	MGP_C3HHeJ_G0031823	Zfp715	75	51.220
MGP_C3HHeJ_G0034162	Zfp872	99	46.667	MGP_C3HHeJ_G0018006	Zfp454	98	46.667
MGP_C3HHeJ_G0034162	Zfp872	84	46.226	MGP_C3HHeJ_G0031558	Zfp574	93	46.226
MGP_C3HHeJ_G0034162	Zfp872	99	51.592	MGP_C3HHeJ_G0031305	Zfp28	82	52.841
MGP_C3HHeJ_G0034162	Zfp872	93	34.726	MGP_C3HHeJ_G0018101	Zfp672	100	40.000