EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0034447 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb16
Alias: AI467657|Green's luxoid|PLZF|Zfp145|lu
Full Name: zinc finger and BTB domain containing 16
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 191924 bases
Position: chr9:47442603-47634526
Accession: 103222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0091804	zf-C2H2	PF00096.26	2.1e-27	1	5
MGP_C3HHeJ_P0091804	zf-C2H2	PF00096.26	2.1e-27	2	5
MGP_C3HHeJ_P0091804	zf-C2H2	PF00096.26	2.1e-27	3	5
MGP_C3HHeJ_P0091804	zf-C2H2	PF00096.26	2.1e-27	4	5
MGP_C3HHeJ_P0091804	zf-C2H2	PF00096.26	2.1e-27	5	5
MGP_C3HHeJ_P0091804	zf-met	PF12874.7	1.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0091804	-	5070	-	MGP_C3HHeJ_P0091804	673 (aa)	-	-
MGP_C3HHeJ_T0091803	-	7470	XM_006510258	MGP_C3HHeJ_P0091803	673 (aa)	XP_006510321	Q3UQ17

Gene Model

Click here to download MGP_C3HHeJ_G0034447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0034447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0034447	Zbtb16	55	34.951	MGP_C3HHeJ_G0016321	Zbtb41	87	34.951
MGP_C3HHeJ_G0034447	Zbtb16	61	36.481	MGP_C3HHeJ_G0026329	Gzf1	61	36.400
MGP_C3HHeJ_G0034447	Zbtb16	67	42.857	MGP_C3HHeJ_G0026836	Mynn	87	42.857
MGP_C3HHeJ_G0034447	Zbtb16	61	36.585	MGP_C3HHeJ_G0028746	Zbtb17	60	38.132
MGP_C3HHeJ_G0034447	Zbtb16	52	39.041	MGP_C3HHeJ_G0020446	Zfp759	97	39.041
MGP_C3HHeJ_G0034447	Zbtb16	51	41.964	MGP_C3HHeJ_G0029207	Zbtb49	61	42.647
MGP_C3HHeJ_G0034447	Zbtb16	50	33.503	MGP_C3HHeJ_G0031279	Zfp865	78	34.000
MGP_C3HHeJ_G0034447	Zbtb16	56	53.957	MGP_C3HHeJ_G0031735	Zbtb32	79	67.901
MGP_C3HHeJ_G0034447	Zbtb16	67	37.391	MGP_C3HHeJ_G0022983	Zscan10	94	37.391
MGP_C3HHeJ_G0034447	Zbtb16	55	37.395	MGP_C3HHeJ_G0016932	Zbtb24	50	37.395
MGP_C3HHeJ_G0034447	Zbtb16	57	39.535	MGP_C3HHeJ_G0018339	Bcl6b	60	39.535