EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0034585 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 30503 bases
Position: chr9:58853452-58883954
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0092235	RRM_1	PF00076.22	2.1e-51	1	3
MGP_C3HHeJ_P0092235	RRM_1	PF00076.22	2.1e-51	2	3
MGP_C3HHeJ_P0092235	RRM_1	PF00076.22	2.1e-51	3	3
MGP_C3HHeJ_P0092233	RRM_1	PF00076.22	2.6e-51	1	3
MGP_C3HHeJ_P0092233	RRM_1	PF00076.22	2.6e-51	2	3
MGP_C3HHeJ_P0092233	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0092232	-	3056	XM_006511540	MGP_C3HHeJ_P0092232	182 (aa)	XP_006511603	Q7TN33
MGP_C3HHeJ_T0092233	-	2975	-	MGP_C3HHeJ_P0092233	481 (aa)	-	-
MGP_C3HHeJ_T0092234	-	2893	-	MGP_C3HHeJ_P0092234	162 (aa)	-	-
MGP_C3HHeJ_T0092235	-	2731	-	MGP_C3HHeJ_P0092235	460 (aa)	-	-
MGP_C3HHeJ_T0092236	-	449	-	-	- (aa)	-	-
MGP_C3HHeJ_T0092237	-	591	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0034585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0034585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0034585	Celf6	51	34.483	MGP_C3HHeJ_G0035723	Pabpc5	63	34.483
MGP_C3HHeJ_G0034585	Celf6	91	45.549	MGP_C3HHeJ_G0025858	Celf1	98	45.135
MGP_C3HHeJ_G0034585	Celf6	52	42.105	MGP_C3HHeJ_G0035085	Rbms3	82	42.105
MGP_C3HHeJ_G0034585	Celf6	91	45.567	MGP_C3HHeJ_G0025065	Celf2	79	80.952
MGP_C3HHeJ_G0034585	Celf6	54	35.802	MGP_C3HHeJ_G0017611	Rbms2	50	35.802
MGP_C3HHeJ_G0034585	Celf6	57	44.444	MGP_C3HHeJ_G0033028	Elavl1	97	44.444
MGP_C3HHeJ_G0034585	Celf6	68	37.113	MGP_C3HHeJ_G0028436	Pabpc4	67	35.211
MGP_C3HHeJ_G0034585	Celf6	62	32.955	MGP_C3HHeJ_G0030756	Tia1	85	36.000
MGP_C3HHeJ_G0034585	Celf6	77	39.062	MGP_C3HHeJ_G0022870	Pabpc6	64	39.062
MGP_C3HHeJ_G0034585	Celf6	54	31.818	MGP_C3HHeJ_G0032780	Tial1	53	32.143
MGP_C3HHeJ_G0034585	Celf6	75	85.401	MGP_C3HHeJ_G0017323	Celf5	95	60.477
MGP_C3HHeJ_G0034585	Celf6	100	67.200	MGP_C3HHeJ_G0023942	Celf4	99	67.066
MGP_C3HHeJ_G0034585	Celf6	79	31.250	MGP_C3HHeJ_G0030429	Hnrnpa2b1	66	32.143
MGP_C3HHeJ_G0034585	Celf6	75	85.526	MGP_C3HHeJ_G0027259	Celf3	81	87.368
MGP_C3HHeJ_G0034585	Celf6	66	32.500	MGP_C3HHeJ_G0018020	Hnrnpab	65	31.414
MGP_C3HHeJ_G0034585	Celf6	89	37.037	MGP_C3HHeJ_G0028138	Elavl2	78	40.741
MGP_C3HHeJ_G0034585	Celf6	57	42.308	MGP_C3HHeJ_G0034155	Elavl3	80	41.975
MGP_C3HHeJ_G0034585	Celf6	95	35.802	MGP_C3HHeJ_G0028272	Elavl4	85	40.741