EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0034749 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Plus strand
Length: 27741 bases
Position: chr9:78497147-78524887
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0092916	KH_1	PF00013.29	4.5e-12	1	1
MGP_C3HHeJ_P0092916	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0092916	-	2207	-	MGP_C3HHeJ_P0092916	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_C3HHeJ_G0034749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0034749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0034749	Ddx43	62	33.580	MGP_C3HHeJ_G0016310	Ddx59	64	33.333
MGP_C3HHeJ_G0034749	Ddx43	64	36.941	MGP_C3HHeJ_G0020351	Ddx41	65	37.232
MGP_C3HHeJ_G0034749	Ddx43	68	43.527	MGP_C3HHeJ_G0021815	Ddx17	67	43.527
MGP_C3HHeJ_G0034749	Ddx43	59	35.678	MGP_C3HHeJ_G0031116	Ddx47	91	34.218
MGP_C3HHeJ_G0034749	Ddx43	56	32.240	MGP_C3HHeJ_G0022409	Eif4a2	91	31.398
MGP_C3HHeJ_G0034749	Ddx43	60	39.012	MGP_C3HHeJ_G0016682	D1Pas1	61	39.012
MGP_C3HHeJ_G0034749	Ddx43	60	40.000	MGP_C3HHeJ_G0020677	Ddx4	56	40.000
MGP_C3HHeJ_G0034749	Ddx43	63	34.135	MGP_C3HHeJ_G0018617	Ddx52	69	34.135
MGP_C3HHeJ_G0034749	Ddx43	55	34.715	MGP_C3HHeJ_G0016181	Ddx18	56	34.715
MGP_C3HHeJ_G0034749	Ddx43	57	40.310	MGP_C3HHeJ_G0035258	Ddx3x	61	39.259
MGP_C3HHeJ_G0034749	Ddx43	74	36.270	MGP_C3HHeJ_G0019049	Ddx42	50	36.270
MGP_C3HHeJ_G0034749	Ddx43	68	45.301	MGP_C3HHeJ_G0019064	Ddx5	89	45.040
MGP_C3HHeJ_G0034749	Ddx43	53	32.044	MGP_C3HHeJ_G0029793	Ddx55	60	32.044
MGP_C3HHeJ_G0034749	Ddx43	54	30.159	MGP_C3HHeJ_G0033760	Ddx28	70	30.423
MGP_C3HHeJ_G0034749	Ddx43	63	40.757	MGP_C3HHeJ_G0022038	Ddx23	54	40.757
MGP_C3HHeJ_G0034749	Ddx43	60	34.913	MGP_C3HHeJ_G0033388	Ddx49	93	34.897
MGP_C3HHeJ_G0034749	Ddx43	54	31.831	MGP_C3HHeJ_G0019227	Eif4a3	84	31.831