EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0035085 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 1102953 bases
Position: chr9:118199366-119302318
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0094697	RRM_1	PF00076.22	1.5e-32	1	2
MGP_C3HHeJ_P0094697	RRM_1	PF00076.22	1.5e-32	2	2
MGP_C3HHeJ_P0094694	RRM_1	PF00076.22	1.2e-31	1	2
MGP_C3HHeJ_P0094694	RRM_1	PF00076.22	1.2e-31	2	2
MGP_C3HHeJ_P0094691	RRM_1	PF00076.22	1.4e-31	1	2
MGP_C3HHeJ_P0094691	RRM_1	PF00076.22	1.4e-31	2	2
MGP_C3HHeJ_P0094689	RRM_1	PF00076.22	1.5e-31	1	2
MGP_C3HHeJ_P0094689	RRM_1	PF00076.22	1.5e-31	2	2
MGP_C3HHeJ_P0094693	RRM_1	PF00076.22	1.5e-31	1	2
MGP_C3HHeJ_P0094693	RRM_1	PF00076.22	1.5e-31	2	2
MGP_C3HHeJ_P0094688	RRM_1	PF00076.22	1.7e-31	1	2
MGP_C3HHeJ_P0094688	RRM_1	PF00076.22	1.7e-31	2	2
MGP_C3HHeJ_P0094692	RRM_1	PF00076.22	2e-31	1	2
MGP_C3HHeJ_P0094692	RRM_1	PF00076.22	2e-31	2	2
MGP_C3HHeJ_P0094695	RRM_1	PF00076.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0094698	-	1438	-	-	- (aa)	-	-
MGP_C3HHeJ_T0094699	-	1753	-	-	- (aa)	-	-
MGP_C3HHeJ_T0094689	-	3314	-	MGP_C3HHeJ_P0094689	414 (aa)	-	-
MGP_C3HHeJ_T0094688	-	7905	XM_017313248	MGP_C3HHeJ_P0094688	431 (aa)	XP_017168737	Q8BWL5
MGP_C3HHeJ_T0094690	-	1625	-	MGP_C3HHeJ_P0094690	185 (aa)	-	-
MGP_C3HHeJ_T0094691	-	2166	-	MGP_C3HHeJ_P0094691	402 (aa)	-	-
MGP_C3HHeJ_T0094692	-	2128	-	MGP_C3HHeJ_P0094692	463 (aa)	-	-
MGP_C3HHeJ_T0094693	-	2236	-	MGP_C3HHeJ_P0094693	415 (aa)	-	-
MGP_C3HHeJ_T0094694	-	1984	-	MGP_C3HHeJ_P0094694	386 (aa)	-	-
MGP_C3HHeJ_T0094695	-	585	-	MGP_C3HHeJ_P0094695	194 (aa)	-	-
MGP_C3HHeJ_T0094696	-	2027	-	-	- (aa)	-	-
MGP_C3HHeJ_T0094697	-	619	-	MGP_C3HHeJ_P0094697	206 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0035085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0035085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0035085	Rbms3	70	38.562	MGP_C3HHeJ_G0034155	Elavl3	63	37.931
MGP_C3HHeJ_G0035085	Rbms3	82	42.105	MGP_C3HHeJ_G0034585	Celf6	52	42.105
MGP_C3HHeJ_G0035085	Rbms3	97	34.356	MGP_C3HHeJ_G0033028	Elavl1	91	34.356
MGP_C3HHeJ_G0035085	Rbms3	83	37.097	MGP_C3HHeJ_G0028272	Elavl4	70	36.458
MGP_C3HHeJ_G0035085	Rbms3	75	37.079	MGP_C3HHeJ_G0025065	Celf2	77	39.474
MGP_C3HHeJ_G0035085	Rbms3	99	80.841	MGP_C3HHeJ_G0025496	Rbms1	96	71.538
MGP_C3HHeJ_G0035085	Rbms3	68	43.421	MGP_C3HHeJ_G0025858	Celf1	53	43.421
MGP_C3HHeJ_G0035085	Rbms3	76	39.474	MGP_C3HHeJ_G0027259	Celf3	91	39.474
MGP_C3HHeJ_G0035085	Rbms3	77	30.818	MGP_C3HHeJ_G0026551	Pabpc1l	59	30.818
MGP_C3HHeJ_G0035085	Rbms3	83	37.222	MGP_C3HHeJ_G0028138	Elavl2	69	37.209
MGP_C3HHeJ_G0035085	Rbms3	77	33.708	MGP_C3HHeJ_G0022870	Pabpc6	59	34.091
MGP_C3HHeJ_G0035085	Rbms3	72	40.789	MGP_C3HHeJ_G0023942	Celf4	68	40.789
MGP_C3HHeJ_G0035085	Rbms3	83	80.663	MGP_C3HHeJ_G0017611	Rbms2	86	66.758