EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C3HHeJ_G0035223 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_c3hhej
Status: putative
Strand: Minus strand
Length: 7758 bases
Position: chrX:2841700-2849457
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C3HHeJ_P0095160	RRM_1	PF00076.22	3.1e-31	1	2
MGP_C3HHeJ_P0095160	RRM_1	PF00076.22	3.1e-31	2	2
MGP_C3HHeJ_P0095161	RRM_1	PF00076.22	3.1e-31	1	2
MGP_C3HHeJ_P0095161	RRM_1	PF00076.22	3.1e-31	2	2
MGP_C3HHeJ_P0095162	RRM_1	PF00076.22	3.1e-31	1	2
MGP_C3HHeJ_P0095162	RRM_1	PF00076.22	3.1e-31	2	2
MGP_C3HHeJ_P0095159	RRM_1	PF00076.22	3.1e-31	1	2
MGP_C3HHeJ_P0095159	RRM_1	PF00076.22	3.1e-31	2	2
MGP_C3HHeJ_P0095163	RRM_1	PF00076.22	3.1e-31	1	2
MGP_C3HHeJ_P0095163	RRM_1	PF00076.22	3.1e-31	2	2
MGP_C3HHeJ_P0095164	RRM_1	PF00076.22	3.1e-31	1	2
MGP_C3HHeJ_P0095164	RRM_1	PF00076.22	3.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C3HHeJ_T0095165	-	1154	-	MGP_C3HHeJ_P0095165	90 (aa)	-	-
MGP_C3HHeJ_T0095164	-	1146	-	MGP_C3HHeJ_P0095164	191 (aa)	-	-
MGP_C3HHeJ_T0095168	-	721	-	-	- (aa)	-	-
MGP_C3HHeJ_T0095161	-	1340	-	MGP_C3HHeJ_P0095161	190 (aa)	-	-
MGP_C3HHeJ_T0095160	-	1080	-	MGP_C3HHeJ_P0095160	190 (aa)	-	-
MGP_C3HHeJ_T0095163	-	1223	-	MGP_C3HHeJ_P0095163	191 (aa)	-	-
MGP_C3HHeJ_T0095162	-	1181	-	MGP_C3HHeJ_P0095162	190 (aa)	-	-
MGP_C3HHeJ_T0095158	-	2234	-	-	- (aa)	-	-
MGP_C3HHeJ_T0095159	-	2903	-	MGP_C3HHeJ_P0095159	191 (aa)	-	-
MGP_C3HHeJ_T0095167	-	1208	-	-	- (aa)	-	-
MGP_C3HHeJ_T0095166	-	1055	-	MGP_C3HHeJ_P0095166	90 (aa)	-	-

Gene Model

Click here to download MGP_C3HHeJ_G0035223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C3HHeJ_G0035223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C3HHeJ_G0035223	Rbm3	99	35.955	MGP_C3HHeJ_G0030756	Tia1	78	30.667
MGP_C3HHeJ_G0035223	Rbm3	87	40.000	MGP_C3HHeJ_G0028436	Pabpc4	68	37.500
MGP_C3HHeJ_G0035223	Rbm3	73	33.333	MGP_C3HHeJ_G0029790	Snrnp35	55	34.848
MGP_C3HHeJ_G0035223	Rbm3	63	51.852	MGP_C3HHeJ_G0018679	Msi2	61	42.857
MGP_C3HHeJ_G0035223	Rbm3	82	38.710	MGP_C3HHeJ_G0028138	Elavl2	63	32.911
MGP_C3HHeJ_G0035223	Rbm3	90	35.385	MGP_C3HHeJ_G0026905	Pabpc4l	83	34.286
MGP_C3HHeJ_G0035223	Rbm3	87	42.188	MGP_C3HHeJ_G0024102	Pabpc2	50	40.541
MGP_C3HHeJ_G0035223	Rbm3	82	38.710	MGP_C3HHeJ_G0028272	Elavl4	58	31.646
MGP_C3HHeJ_G0035223	Rbm3	78	55.714	MGP_C3HHeJ_G0035420	Rbmx	79	56.790
MGP_C3HHeJ_G0035223	Rbm3	70	48.077	MGP_C3HHeJ_G0017255	Dazap1	78	45.161
MGP_C3HHeJ_G0035223	Rbm3	78	37.931	MGP_C3HHeJ_G0029479	Hnrnpd	70	34.667
MGP_C3HHeJ_G0035223	Rbm3	90	70.370	MGP_C3HHeJ_G0017249	Cirbp	98	60.714