EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0019436	dsrm	PF00035.26	6.6e-45	1	4
MGP_C57BL6NJ_P0019436	dsrm	PF00035.26	6.6e-45	2	4
MGP_C57BL6NJ_P0019436	dsrm	PF00035.26	6.6e-45	3	4
MGP_C57BL6NJ_P0019436	dsrm	PF00035.26	6.6e-45	4	4
MGP_C57BL6NJ_P0019427	dsrm	PF00035.26	1e-44	1	4
MGP_C57BL6NJ_P0019427	dsrm	PF00035.26	1e-44	2	4
MGP_C57BL6NJ_P0019427	dsrm	PF00035.26	1e-44	3	4
MGP_C57BL6NJ_P0019427	dsrm	PF00035.26	1e-44	4	4
MGP_C57BL6NJ_P0019428	dsrm	PF00035.26	1e-44	1	4
MGP_C57BL6NJ_P0019428	dsrm	PF00035.26	1e-44	2	4
MGP_C57BL6NJ_P0019428	dsrm	PF00035.26	1e-44	3	4
MGP_C57BL6NJ_P0019428	dsrm	PF00035.26	1e-44	4	4
MGP_C57BL6NJ_P0019432	dsrm	PF00035.26	1.5e-38	1	3
MGP_C57BL6NJ_P0019432	dsrm	PF00035.26	1.5e-38	2	3
MGP_C57BL6NJ_P0019432	dsrm	PF00035.26	1.5e-38	3	3
MGP_C57BL6NJ_P0019434	dsrm	PF00035.26	1.5e-38	1	3
MGP_C57BL6NJ_P0019434	dsrm	PF00035.26	1.5e-38	2	3
MGP_C57BL6NJ_P0019434	dsrm	PF00035.26	1.5e-38	3	3
MGP_C57BL6NJ_P0019429	dsrm	PF00035.26	2.3e-38	1	3
MGP_C57BL6NJ_P0019429	dsrm	PF00035.26	2.3e-38	2	3
MGP_C57BL6NJ_P0019429	dsrm	PF00035.26	2.3e-38	3	3
MGP_C57BL6NJ_P0019430	dsrm	PF00035.26	2.3e-38	1	3
MGP_C57BL6NJ_P0019430	dsrm	PF00035.26	2.3e-38	2	3
MGP_C57BL6NJ_P0019430	dsrm	PF00035.26	2.3e-38	3	3
MGP_C57BL6NJ_P0019431	dsrm	PF00035.26	2.3e-38	1	3
MGP_C57BL6NJ_P0019431	dsrm	PF00035.26	2.3e-38	2	3
MGP_C57BL6NJ_P0019431	dsrm	PF00035.26	2.3e-38	3	3
MGP_C57BL6NJ_P0019438	dsrm	PF00035.26	3.1e-09	1	1
MGP_C57BL6NJ_P0019439	dsrm	PF00035.26	5.3e-09	1	1
MGP_C57BL6NJ_P0019441	dsrm	PF00035.26	5.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0019428	-	2907	-	MGP_C57BL6NJ_P0019428	570 (aa)	-	-
MGP_C57BL6NJ_T0019429	-	2773	-	MGP_C57BL6NJ_P0019429	538 (aa)	-	-
MGP_C57BL6NJ_T0019439	-	1151	-	MGP_C57BL6NJ_P0019439	125 (aa)	-	-
MGP_C57BL6NJ_T0019438	-	455	-	MGP_C57BL6NJ_P0019438	97 (aa)	-	-
MGP_C57BL6NJ_T0019437	-	369	-	MGP_C57BL6NJ_P0019437	55 (aa)	-	-
MGP_C57BL6NJ_T0019436	-	1536	-	MGP_C57BL6NJ_P0019436	511 (aa)	-	-
MGP_C57BL6NJ_T0019435	-	3081	-	MGP_C57BL6NJ_P0019435	112 (aa)	-	-
MGP_C57BL6NJ_T0019434	-	2964	-	MGP_C57BL6NJ_P0019434	479 (aa)	-	-
MGP_C57BL6NJ_T0019433	-	2198	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0019432	-	3901	-	MGP_C57BL6NJ_P0019432	479 (aa)	-	-
MGP_C57BL6NJ_T0019431	-	2735	-	MGP_C57BL6NJ_P0019431	538 (aa)	-	-
MGP_C57BL6NJ_T0019430	-	2763	-	MGP_C57BL6NJ_P0019430	538 (aa)	-	-
MGP_C57BL6NJ_T0019427	-	3030	XM_006495528	MGP_C57BL6NJ_P0019427	570 (aa)	XP_006495591	Q8CJ67
MGP_C57BL6NJ_T0019440	-	564	-	MGP_C57BL6NJ_P0019440	93 (aa)	-	-
MGP_C57BL6NJ_T0019441	-	585	-	MGP_C57BL6NJ_P0019441	125 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016246	Stau2	84	48.046	MGP_C57BL6NJ_G0027328	Stau1	86	48.055