EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0016293 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 23840 bases
Position: chr1:33565507-33589346
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0019620	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_C57BL6NJ_P0019624	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0019622	-	2047	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0019623	-	1087	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0019620	-	4322	-	MGP_C57BL6NJ_P0019620	237 (aa)	-	-
MGP_C57BL6NJ_T0019621	-	4398	-	MGP_C57BL6NJ_P0019621	64 (aa)	-	-
MGP_C57BL6NJ_T0019626	-	437	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0019627	-	1764	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0019624	-	4218	-	MGP_C57BL6NJ_P0019624	237 (aa)	-	-
MGP_C57BL6NJ_T0019625	-	1966	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0019619	-	444	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0019618	-	2557	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0016293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0016293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016293	Rab23	66	30.909	MGP_C57BL6NJ_G0019954	Dnajc27	60	30.909
MGP_C57BL6NJ_G0016293	Rab23	68	33.129	MGP_C57BL6NJ_G0032029	Rasl2-9	74	33.129
MGP_C57BL6NJ_G0016293	Rab23	70	34.337	MGP_C57BL6NJ_G0018457	Rab1a	81	34.337
MGP_C57BL6NJ_G0016293	Rab23	65	31.410	MGP_C57BL6NJ_G0031923	Kras	94	32.778
MGP_C57BL6NJ_G0016293	Rab23	82	31.795	MGP_C57BL6NJ_G0027819	Rab25	89	31.795
MGP_C57BL6NJ_G0016293	Rab23	80	33.508	MGP_C57BL6NJ_G0023942	Rab11b	97	35.417
MGP_C57BL6NJ_G0016293	Rab23	77	38.172	MGP_C57BL6NJ_G0017745	Rab36	69	38.172
MGP_C57BL6NJ_G0016293	Rab23	65	34.375	MGP_C57BL6NJ_G0036753	Rab9	79	34.375
MGP_C57BL6NJ_G0016293	Rab23	81	30.570	MGP_C57BL6NJ_G0024384	Rab31	94	30.570
MGP_C57BL6NJ_G0016293	Rab23	75	32.086	MGP_C57BL6NJ_G0030062	Rasl11b	74	32.086
MGP_C57BL6NJ_G0016293	Rab23	72	34.682	MGP_C57BL6NJ_G0020255	Rab15	81	34.682
MGP_C57BL6NJ_G0016293	Rab23	70	34.337	MGP_C57BL6NJ_G0025106	Rab1b	83	34.337
MGP_C57BL6NJ_G0016293	Rab23	65	36.129	MGP_C57BL6NJ_G0029786	Rheb	84	36.129
MGP_C57BL6NJ_G0016293	Rab23	66	39.873	MGP_C57BL6NJ_G0033057	Rab6a	76	39.873
MGP_C57BL6NJ_G0016293	Rab23	69	35.119	MGP_C57BL6NJ_G0024393	Rab12	68	35.119
MGP_C57BL6NJ_G0016293	Rab23	68	30.864	MGP_C57BL6NJ_G0030553	Ran	95	30.864
MGP_C57BL6NJ_G0016293	Rab23	66	37.654	MGP_C57BL6NJ_G0036600	Rab9b	80	37.654
MGP_C57BL6NJ_G0016293	Rab23	66	41.139	MGP_C57BL6NJ_G0035686	Rab6b	76	41.139
MGP_C57BL6NJ_G0016293	Rab23	80	32.984	MGP_C57BL6NJ_G0035435	Rab11a	92	34.752
MGP_C57BL6NJ_G0016293	Rab23	61	32.192	MGP_C57BL6NJ_G0028104	Nras	95	35.862
MGP_C57BL6NJ_G0016293	Rab23	72	35.465	MGP_C57BL6NJ_G0024539	Rab18	83	35.465
MGP_C57BL6NJ_G0016293	Rab23	75	34.831	MGP_C57BL6NJ_G0030405	Rab35	95	33.684
MGP_C57BL6NJ_G0016293	Rab23	67	35.152	MGP_C57BL6NJ_G0027616	Rab33b	72	35.152
MGP_C57BL6NJ_G0016293	Rab23	73	33.143	MGP_C57BL6NJ_G0019764	Rab37	79	33.143
MGP_C57BL6NJ_G0016293	Rab23	70	33.918	MGP_C57BL6NJ_G0031441	Rab7	94	43.478
MGP_C57BL6NJ_G0016293	Rab23	67	38.125	MGP_C57BL6NJ_G0024293	Rab5a	74	38.125
MGP_C57BL6NJ_G0016293	Rab23	70	34.337	MGP_C57BL6NJ_G0026068	Rab14	88	35.338
MGP_C57BL6NJ_G0016293	Rab23	61	31.507	MGP_C57BL6NJ_G0033708	Hras	92	31.818
MGP_C57BL6NJ_G0016293	Rab23	74	37.500	MGP_C57BL6NJ_G0032997	Rab30	87	37.500
MGP_C57BL6NJ_G0016293	Rab23	77	31.383	MGP_C57BL6NJ_G0036192	Rab33a	79	31.383
MGP_C57BL6NJ_G0016293	Rab23	86	32.850	MGP_C57BL6NJ_G0021694	Rab2b	94	32.850
MGP_C57BL6NJ_G0016293	Rab23	74	35.227	MGP_C57BL6NJ_G0019558	Rab5c	81	35.227
MGP_C57BL6NJ_G0016293	Rab23	83	32.487	MGP_C57BL6NJ_G0028452	Rab2a	95	31.863
MGP_C57BL6NJ_G0016293	Rab23	64	38.462	MGP_C57BL6NJ_G0019159	Rab34	60	38.462
MGP_C57BL6NJ_G0016293	Rab23	65	33.766	MGP_C57BL6NJ_G0027382	Rab22a	79	33.766
MGP_C57BL6NJ_G0016293	Rab23	67	31.765	MGP_C57BL6NJ_G0030817	Rasl11a	69	31.765
MGP_C57BL6NJ_G0016293	Rab23	65	36.538	MGP_C57BL6NJ_G0036361	Rab39b	73	36.538