EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0016426 (Gene tree)
Gene ID: -
Gene Symbol: Boll
Alias: 4930554P13Rik|4930597B14Rik
Full Name: bol%2C boule-like (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 123483 bases
Position: chr1:57251200-57374682
Accession: 1922638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0020333	RRM_1	PF00076.22	3.5e-20	1	1
MGP_C57BL6NJ_P0020329	RRM_1	PF00076.22	1.7e-19	1	1
MGP_C57BL6NJ_P0020332	RRM_1	PF00076.22	1.8e-19	1	1
MGP_C57BL6NJ_P0020333	RRM_3	PF08777.11	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0020329	-	2635	-	MGP_C57BL6NJ_P0020329	282 (aa)	-	-
MGP_C57BL6NJ_T0020328	-	525	XM_006496310	MGP_C57BL6NJ_P0020328	37 (aa)	XP_006496373	Q924M5
MGP_C57BL6NJ_T0020334	-	147	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020330	-	751	-	MGP_C57BL6NJ_P0020330	87 (aa)	-	-
MGP_C57BL6NJ_T0020331	-	1106	-	MGP_C57BL6NJ_P0020331	160 (aa)	-	-
MGP_C57BL6NJ_T0020332	-	882	-	MGP_C57BL6NJ_P0020332	293 (aa)	-	-
MGP_C57BL6NJ_T0020333	-	658	-	MGP_C57BL6NJ_P0020333	132 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0016426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0016426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016426	Boll	83	44.186	MGP_C57BL6NJ_G0017886	Dazap1	77	39.744
MGP_C57BL6NJ_G0016426	Boll	65	36.782	MGP_C57BL6NJ_G0036247	Rbmx	79	36.782
MGP_C57BL6NJ_G0016426	Boll	57	34.211	MGP_C57BL6NJ_G0036039	Rbm3	64	34.483
MGP_C57BL6NJ_G0016426	Boll	57	32.000	MGP_C57BL6NJ_G0025747	Celf2	61	35.714
MGP_C57BL6NJ_G0016426	Boll	50	35.294	MGP_C57BL6NJ_G0030211	Hnrnpd	69	35.294
MGP_C57BL6NJ_G0016426	Boll	50	43.939	MGP_C57BL6NJ_G0019862	Rbfox3	72	31.429
MGP_C57BL6NJ_G0016426	Boll	65	32.857	MGP_C57BL6NJ_G0019317	Msi2	50	33.333
MGP_C57BL6NJ_G0016426	Boll	64	33.333	MGP_C57BL6NJ_G0031170	Hnrnpa2b1	69	31.776
MGP_C57BL6NJ_G0016426	Boll	58	32.911	MGP_C57BL6NJ_G0032700	Snrnp70	52	35.000