EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0016433 (Gene tree)
Gene ID: -
Gene Symbol: Spats2l
Alias: 2810022L02Rik|A230104H11Rik|AA987173|AI480531|AI842453|AW413586
Full Name: spermatogenesis associated%2C serine-rich 2-like
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 176906 bases
Position: chr1:59969419-60146324
Accession: 1914448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0020366	DUF1387	PF07139.11	2.6e-128	1	1
MGP_C57BL6NJ_P0020362	DUF1387	PF07139.11	1.8e-75	1	2
MGP_C57BL6NJ_P0020362	DUF1387	PF07139.11	1.8e-75	2	2
MGP_C57BL6NJ_P0020359	DUF1387	PF07139.11	3e-28	1	1
MGP_C57BL6NJ_P0020361	DUF1387	PF07139.11	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0020364	-	417	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020365	-	384	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020357	-	823	XM_006496210	MGP_C57BL6NJ_P0020357	108 (aa)	XP_006496273	Q91WJ7
MGP_C57BL6NJ_T0020367	-	325	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020366	-	1947	-	MGP_C57BL6NJ_P0020366	648 (aa)	-	-
MGP_C57BL6NJ_T0020358	-	655	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020359	-	1021	-	MGP_C57BL6NJ_P0020359	244 (aa)	-	-
MGP_C57BL6NJ_T0020363	-	2348	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020362	-	965	-	MGP_C57BL6NJ_P0020362	270 (aa)	-	-
MGP_C57BL6NJ_T0020361	-	691	-	MGP_C57BL6NJ_P0020361	130 (aa)	-	-
MGP_C57BL6NJ_T0020360	-	1207	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0016433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016433	Spats2l	85	50.450	MGP_C57BL6NJ_G0022733	Spats2	68	48.698