EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0016460 (Gene tree)
Gene ID
-
Gene Symbol
Nop58
Alias
MSSP|Nol5|SIK|SIK similar protein|nop5
Full Name
NOP58 ribonucleoprotein
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Plus strand
Length
37423 bases
Position
chr1:62016228-62053650
Accession
1933184
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0020518NopPF01798.186.5e-8411
MGP_C57BL6NJ_P0020522NopPF01798.181.8e-8311
MGP_C57BL6NJ_P0020530NopPF01798.183.4e-4111
MGP_C57BL6NJ_P0020531NopPF01798.183.7e-3911
MGP_C57BL6NJ_P0020518NOP5NTPF08156.131.3e-2311
MGP_C57BL6NJ_P0020522NOP5NTPF08156.134.1e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0020517-576--- (aa)--
MGP_C57BL6NJ_T0020530-638-MGP_C57BL6NJ_P0020530212 (aa)--
MGP_C57BL6NJ_T0020531-585-MGP_C57BL6NJ_P0020531194 (aa)--
MGP_C57BL6NJ_T0020518-1713-MGP_C57BL6NJ_P0020518444 (aa)--
MGP_C57BL6NJ_T0020519-639-MGP_C57BL6NJ_P002051928 (aa)--
MGP_C57BL6NJ_T0020529-373-MGP_C57BL6NJ_P002052959 (aa)--
MGP_C57BL6NJ_T0020528-714-MGP_C57BL6NJ_P0020528191 (aa)--
MGP_C57BL6NJ_T0020525-623--- (aa)--
MGP_C57BL6NJ_T0020524-702-MGP_C57BL6NJ_P002052460 (aa)--
MGP_C57BL6NJ_T0020527-598-MGP_C57BL6NJ_P0020527145 (aa)--
MGP_C57BL6NJ_T0020526-891--- (aa)--
MGP_C57BL6NJ_T0020521-725--- (aa)--
MGP_C57BL6NJ_T0020520-653--- (aa)--
MGP_C57BL6NJ_T0020523-461-MGP_C57BL6NJ_P002052320 (aa)--
MGP_C57BL6NJ_T0020522-9483-MGP_C57BL6NJ_P0020522536 (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0016460's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0016460's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0016460Nop589345.355MGP_C57BL6NJ_G0026918Nop569441.525

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