EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0016537 (Gene tree)
Gene ID: -
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|AI854243|Brp17|Kiaa1184|MNCb-5687|MR-1|Mr1|Tahccp2
Full Name: paroxysmal nonkinesiogenic dyskinesia
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 79065 bases
Position: chr1:77780348-77859412
Accession: 1930773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0020933	Lactamase_B	PF00753.27	2.5e-10	1	1
MGP_C57BL6NJ_P0020920	Lactamase_B	PF00753.27	2.9e-10	1	1
MGP_C57BL6NJ_P0020923	Lactamase_B	PF00753.27	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0020921	-	881	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020920	-	2937	-	MGP_C57BL6NJ_P0020920	385 (aa)	-	-
MGP_C57BL6NJ_T0020923	-	3054	-	MGP_C57BL6NJ_P0020923	424 (aa)	-	-
MGP_C57BL6NJ_T0020922	-	435	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020924	-	416	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020934	-	3599	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0020933	-	2859	-	MGP_C57BL6NJ_P0020933	360 (aa)	-	-
MGP_C57BL6NJ_T0020919	-	740	XM_006496167	MGP_C57BL6NJ_P0020919	142 (aa)	XP_006496230	Q69ZP3

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016537	Pnkd	63	42.105	MGP_C57BL6NJ_G0023772	Haghl	100	40.351
MGP_C57BL6NJ_G0016537	Pnkd	74	40.977	MGP_C57BL6NJ_G0023733	Hagh	96	44.099