EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0016738 (Gene tree)
Gene ID: -
Gene Symbol: Hdlbp
Alias: 1110005P14Rik|AA960365|AI118566|D1Ertd101e
Full Name: high density lipoprotein (HDL) binding protein
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 74493 bases
Position: chr1:98645242-98719734
Accession: 99256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	1	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	2	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	3	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	4	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	5	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	6	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	7	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	8	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	9	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	10	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	11	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	12	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	13	14
MGP_C57BL6NJ_P0021909	KH_1	PF00013.29	5.3e-188	14	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	1	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	2	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	3	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	4	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	5	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	6	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	7	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	8	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	9	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	10	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	11	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	12	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	13	14
MGP_C57BL6NJ_P0021910	KH_1	PF00013.29	5.3e-188	14	14
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	1	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	2	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	3	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	4	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	5	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	6	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	7	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	8	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	9	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	10	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	11	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	12	13
MGP_C57BL6NJ_P0021911	KH_1	PF00013.29	1.1e-176	13	13
MGP_C57BL6NJ_P0021914	KH_1	PF00013.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0021913	-	528	-	MGP_C57BL6NJ_P0021913	22 (aa)	-	-
MGP_C57BL6NJ_T0021912	-	2172	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0021911	-	3808	-	MGP_C57BL6NJ_P0021911	1199 (aa)	-	-
MGP_C57BL6NJ_T0021910	-	4427	-	MGP_C57BL6NJ_P0021910	1268 (aa)	-	-
MGP_C57BL6NJ_T0021917	-	630	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0021909	-	6231	XM_006529074	MGP_C57BL6NJ_P0021909	1268 (aa)	XP_006529137	Q8VDJ3
MGP_C57BL6NJ_T0021915	-	671	-	MGP_C57BL6NJ_P0021915	141 (aa)	-	-
MGP_C57BL6NJ_T0021914	-	740	-	MGP_C57BL6NJ_P0021914	178 (aa)	-	-
MGP_C57BL6NJ_T0021919	-	3202	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0021918	-	341	-	MGP_C57BL6NJ_P0021918	22 (aa)	-	-
MGP_C57BL6NJ_T0021916	-	850	-	MGP_C57BL6NJ_P0021916	129 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0016738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0016738's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016738	Hdlbp	94	50.276	MGP_C57BL6NJ_G0036545	Gm382	95	50.276
MGP_C57BL6NJ_G0016738	Hdlbp	91	46.008	MGP_C57BL6NJ_G0036546	4921511C20Rik	100	46.008