EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0016739 (Gene tree)
Gene ID: -
Gene Symbol: Sept2
Alias: AW208991|Nedd-5|Nedd5|mKIAA0158
Full Name: septin 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 32195 bases
Position: chr1:98719909-98752103
Accession: 97298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0021921	MMR_HSR1	PF01926.23	9.7e-08	1	1
MGP_C57BL6NJ_P0021926	MMR_HSR1	PF01926.23	9.8e-08	1	1
MGP_C57BL6NJ_P0021927	MMR_HSR1	PF01926.23	1e-07	1	1
MGP_C57BL6NJ_P0021930	MMR_HSR1	PF01926.23	1e-07	1	1
MGP_C57BL6NJ_P0021920	MMR_HSR1	PF01926.23	1.3e-07	1	1
MGP_C57BL6NJ_P0021928	MMR_HSR1	PF01926.23	1.5e-07	1	1
MGP_C57BL6NJ_P0021929	MMR_HSR1	PF01926.23	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0021926	-	784	-	MGP_C57BL6NJ_P0021926	213 (aa)	-	-
MGP_C57BL6NJ_T0021927	-	756	-	MGP_C57BL6NJ_P0021927	221 (aa)	-	-
MGP_C57BL6NJ_T0021924	-	2051	-	MGP_C57BL6NJ_P0021924	361 (aa)	-	-
MGP_C57BL6NJ_T0021925	-	3309	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0021922	-	696	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0021923	-	424	-	MGP_C57BL6NJ_P0021923	77 (aa)	-	-
MGP_C57BL6NJ_T0021920	-	512	XM_006529240	MGP_C57BL6NJ_P0021920	107 (aa)	XP_006529303	P42208
MGP_C57BL6NJ_T0021921	-	730	-	MGP_C57BL6NJ_P0021921	212 (aa)	-	-
MGP_C57BL6NJ_T0021932	-	418	-	MGP_C57BL6NJ_P0021932	44 (aa)	-	-
MGP_C57BL6NJ_T0021928	-	477	-	MGP_C57BL6NJ_P0021928	120 (aa)	-	-
MGP_C57BL6NJ_T0021929	-	552	-	MGP_C57BL6NJ_P0021929	177 (aa)	-	-
MGP_C57BL6NJ_T0021931	-	466	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0021930	-	779	-	MGP_C57BL6NJ_P0021930	221 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0016739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0016739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016739	Sept2	100	50.000	MGP_C57BL6NJ_G0022549	Sept3	89	49.007
MGP_C57BL6NJ_G0016739	Sept2	100	65.421	MGP_C57BL6NJ_G0019298	Sept4	93	68.837
MGP_C57BL6NJ_G0016739	Sept2	100	41.284	MGP_C57BL6NJ_G0036134	Sept6	69	43.234
MGP_C57BL6NJ_G0016739	Sept2	100	60.748	MGP_C57BL6NJ_G0033520	Sept1	100	64.828
MGP_C57BL6NJ_G0016739	Sept2	100	41.818	MGP_C57BL6NJ_G0018690	Sept8	70	42.812
MGP_C57BL6NJ_G0016739	Sept2	100	62.037	MGP_C57BL6NJ_G0034987	Sept7	65	62.887
MGP_C57BL6NJ_G0016739	Sept2	100	64.486	MGP_C57BL6NJ_G0023031	Sept5	92	60.059
MGP_C57BL6NJ_G0016739	Sept2	100	48.148	MGP_C57BL6NJ_G0022895	Sept12	81	43.077
MGP_C57BL6NJ_G0016739	Sept2	100	42.202	MGP_C57BL6NJ_G0030188	Sept11	69	43.234
MGP_C57BL6NJ_G0016739	Sept2	100	49.778	MGP_C57BL6NJ_G0019838	Sept9	88	49.767
MGP_C57BL6NJ_G0016739	Sept2	100	41.228	MGP_C57BL6NJ_G0017649	Sept10	67	43.144