EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0016816 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 17807 bases
Position: chr1:129139040-129156846
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0022249	DEAD	PF00270.29	4.7e-31	1	2
MGP_C57BL6NJ_P0022249	DEAD	PF00270.29	4.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0022251	-	512	-	MGP_C57BL6NJ_P0022251	170 (aa)	-	-
MGP_C57BL6NJ_T0022250	-	622	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0022249	-	2179	XM_006529794	MGP_C57BL6NJ_P0022249	642 (aa)	XP_006529857	Q8K363
MGP_C57BL6NJ_T0022252	-	451	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0016816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0016816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016816	Ddx18	56	31.282	MGP_C57BL6NJ_G0017699	Ddx50	61	30.047
MGP_C57BL6NJ_G0016816	Ddx18	55	30.971	MGP_C57BL6NJ_G0019255	Ddx52	68	30.095
MGP_C57BL6NJ_G0016816	Ddx18	64	33.134	MGP_C57BL6NJ_G0025950	Ddx31	72	33.134
MGP_C57BL6NJ_G0016816	Ddx18	50	30.199	MGP_C57BL6NJ_G0020986	Ddx41	54	30.199
MGP_C57BL6NJ_G0016816	Ddx18	66	41.781	MGP_C57BL6NJ_G0035299	Ddx10	50	41.781
MGP_C57BL6NJ_G0016816	Ddx18	51	30.259	MGP_C57BL6NJ_G0022487	Ddx17	52	30.205
MGP_C57BL6NJ_G0016816	Ddx18	53	30.108	MGP_C57BL6NJ_G0036071	Ddx3x	56	30.376
MGP_C57BL6NJ_G0016816	Ddx18	55	35.955	MGP_C57BL6NJ_G0031854	Ddx47	88	35.955
MGP_C57BL6NJ_G0016816	Ddx18	63	37.624	MGP_C57BL6NJ_G0030529	Ddx55	68	36.893
MGP_C57BL6NJ_G0016816	Ddx18	53	30.108	MGP_C57BL6NJ_G0017321	D1Pas1	56	30.108
MGP_C57BL6NJ_G0016816	Ddx18	55	32.000	MGP_C57BL6NJ_G0035558	Ddx43	55	32.086
MGP_C57BL6NJ_G0016816	Ddx18	61	34.856	MGP_C57BL6NJ_G0027329	Ddx27	53	34.615
MGP_C57BL6NJ_G0016816	Ddx18	56	33.509	MGP_C57BL6NJ_G0034195	Ddx49	77	33.509