EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0016892 (Gene tree)
Gene ID: -
Gene Symbol: Snrpe
Alias: AL022645|C76690|SME
Full Name: small nuclear ribonucleoprotein E
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 6365 bases
Position: chr1:142228183-142234547
Accession: 98346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0022602	LSM	PF01423.22	2.1e-17	1	1
MGP_C57BL6NJ_P0022604	LSM	PF01423.22	8.9e-12	1	1
MGP_C57BL6NJ_P0022605	LSM	PF01423.22	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0022602	-	422	-	MGP_C57BL6NJ_P0022602	92 (aa)	-	P62305
MGP_C57BL6NJ_T0022603	-	653	-	MGP_C57BL6NJ_P0022603	69 (aa)	-	-
MGP_C57BL6NJ_T0022606	-	597	-	MGP_C57BL6NJ_P0022606	69 (aa)	-	-
MGP_C57BL6NJ_T0022604	-	669	-	MGP_C57BL6NJ_P0022604	91 (aa)	-	-
MGP_C57BL6NJ_T0022605	-	75	-	MGP_C57BL6NJ_P0022605	25 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0016892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0016892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016892	Snrpe	77	32.877	MGP_C57BL6NJ_G0031215	Lsm5	76	32.877