EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0016956 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb41
Alias: 8430415N23Rik|9430031N01|9830132G07Rik|AI316857
Full Name: zinc finger and BTB domain containing 41
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 26896 bases
Position: chr1:148518676-148545571
Accession: 2444487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0022910	zf-C2H2	PF00096.26	6e-36	1	6
MGP_C57BL6NJ_P0022910	zf-C2H2	PF00096.26	6e-36	2	6
MGP_C57BL6NJ_P0022910	zf-C2H2	PF00096.26	6e-36	3	6
MGP_C57BL6NJ_P0022910	zf-C2H2	PF00096.26	6e-36	4	6
MGP_C57BL6NJ_P0022910	zf-C2H2	PF00096.26	6e-36	5	6
MGP_C57BL6NJ_P0022910	zf-C2H2	PF00096.26	6e-36	6	6
MGP_C57BL6NJ_P0022910	zf-met	PF12874.7	0.00043	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0022912	-	3803	-	MGP_C57BL6NJ_P0022912	218 (aa)	-	-
MGP_C57BL6NJ_T0022910	-	2127	XM_006529446	MGP_C57BL6NJ_P0022910	657 (aa)	XP_006529509	Q811F1
MGP_C57BL6NJ_T0022911	-	2853	-	MGP_C57BL6NJ_P0022911	908 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0016956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0016956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0016956	Zbtb41	59	34.343	MGP_C57BL6NJ_G0027315	Zfp334	68	41.026
MGP_C57BL6NJ_G0016956	Zbtb41	63	32.759	MGP_C57BL6NJ_G0035948	Zfp651	66	33.071
MGP_C57BL6NJ_G0016956	Zbtb41	50	37.374	MGP_C57BL6NJ_G0021105	Zfp748	92	35.690
MGP_C57BL6NJ_G0016956	Zbtb41	54	40.789	MGP_C57BL6NJ_G0033529	Zfp747	71	40.789
MGP_C57BL6NJ_G0016956	Zbtb41	64	39.326	MGP_C57BL6NJ_G0027540	Mynn	61	39.326
MGP_C57BL6NJ_G0016956	Zbtb41	89	30.769	MGP_C57BL6NJ_G0021364	Zfp131	70	30.061
MGP_C57BL6NJ_G0016956	Zbtb41	89	36.879	MGP_C57BL6NJ_G0024402	Zbtb14	94	36.879
MGP_C57BL6NJ_G0016956	Zbtb41	54	34.286	MGP_C57BL6NJ_G0027031	Gzf1	84	34.286
MGP_C57BL6NJ_G0016956	Zbtb41	55	34.167	MGP_C57BL6NJ_G0032019	Zfp865	79	41.071
MGP_C57BL6NJ_G0016956	Zbtb41	50	35.714	MGP_C57BL6NJ_G0030303	4930522L14Rik	97	35.714
MGP_C57BL6NJ_G0016956	Zbtb41	61	38.824	MGP_C57BL6NJ_G0025014	Zfp236	67	36.782
MGP_C57BL6NJ_G0016956	Zbtb41	52	36.393	MGP_C57BL6NJ_G0032267	Zfp111	72	36.620
MGP_C57BL6NJ_G0016956	Zbtb41	68	35.786	MGP_C57BL6NJ_G0023635	Zfp677	82	34.845
MGP_C57BL6NJ_G0016956	Zbtb41	61	37.379	MGP_C57BL6NJ_G0032271	Zfp94	82	37.379
MGP_C57BL6NJ_G0016956	Zbtb41	58	41.844	MGP_C57BL6NJ_G0031616	Zfp637	72	41.844
MGP_C57BL6NJ_G0016956	Zbtb41	53	32.797	MGP_C57BL6NJ_G0023666	Zscan10	76	32.797
MGP_C57BL6NJ_G0016956	Zbtb41	71	41.279	MGP_C57BL6NJ_G0029938	Zbtb49	62	47.887
MGP_C57BL6NJ_G0016956	Zbtb41	63	37.500	MGP_C57BL6NJ_G0018653	Zfp354a	69	37.500
MGP_C57BL6NJ_G0016956	Zbtb41	57	33.929	MGP_C57BL6NJ_G0034261	Zfp709	88	36.410
MGP_C57BL6NJ_G0016956	Zbtb41	54	32.776	MGP_C57BL6NJ_G0021088	Zfp759	88	39.623
MGP_C57BL6NJ_G0016956	Zbtb41	58	33.910	MGP_C57BL6NJ_G0034262	Zfp882	76	33.910