EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0017000 (Gene tree)
Gene ID: -
Gene Symbol: Dhx9
Alias: AI326842|Ddx9|HEL-5|NDH II|NDHII|RHA|RNA helicase|leukophysin|mHEL-5|nuclear DNA helicase II
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 9
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 33098 bases
Position: chr1:163754437-163787534
Accession: 108177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0023135	dsrm	PF00035.26	9.9e-27	1	2
MGP_C57BL6NJ_P0023135	dsrm	PF00035.26	9.9e-27	2	2
MGP_C57BL6NJ_P0023132	dsrm	PF00035.26	3.7e-26	1	2
MGP_C57BL6NJ_P0023132	dsrm	PF00035.26	3.7e-26	2	2
MGP_C57BL6NJ_P0023131	dsrm	PF00035.26	3.7e-26	1	2
MGP_C57BL6NJ_P0023131	dsrm	PF00035.26	3.7e-26	2	2
MGP_C57BL6NJ_P0023135	DEAD	PF00270.29	2.5e-06	1	1
MGP_C57BL6NJ_P0023131	DEAD	PF00270.29	7.8e-06	1	1
MGP_C57BL6NJ_P0023132	DEAD	PF00270.29	7.8e-06	1	1
MGP_C57BL6NJ_P0023131	HA2	PF04408.23	1.2e-14	1	1
MGP_C57BL6NJ_P0023132	HA2	PF04408.23	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0023139	-	1604	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0023138	-	2274	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0023137	-	2658	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0023136	-	658	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0023135	-	2346	-	MGP_C57BL6NJ_P0023135	735 (aa)	-	-
MGP_C57BL6NJ_T0023134	-	2018	-	MGP_C57BL6NJ_P0023134	46 (aa)	-	-
MGP_C57BL6NJ_T0023133	-	2406	-	MGP_C57BL6NJ_P0023133	459 (aa)	-	-
MGP_C57BL6NJ_T0023132	-	4616	-	MGP_C57BL6NJ_P0023132	1384 (aa)	-	-
MGP_C57BL6NJ_T0023131	-	4561	XM_011247918	MGP_C57BL6NJ_P0023131	1383 (aa)	XP_011246220	A0A087WPL5

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0017000	Dhx9	54	35.915	MGP_C57BL6NJ_G0024463	Dhx57	63	35.681
MGP_C57BL6NJ_G0017000	Dhx9	53	38.034	MGP_C57BL6NJ_G0027678	Dhx36	76	37.613
MGP_C57BL6NJ_G0017000	Dhx9	54	32.518	MGP_C57BL6NJ_G0027225	Dhx35	52	31.051
MGP_C57BL6NJ_G0017000	Dhx9	58	32.593	MGP_C57BL6NJ_G0021328	Dhx29	65	31.655
MGP_C57BL6NJ_G0017000	Dhx9	56	47.685	MGP_C57BL6NJ_G0024813	Ythdc2	90	35.912
MGP_C57BL6NJ_G0017000	Dhx9	52	40.153	MGP_C57BL6NJ_G0035839	Dhx30	62	32.861