EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0017607 (Gene tree)
Gene ID: -
Gene Symbol: Ascc3
Alias: ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 280226 bases
Position: chr10:51228965-51509190
Accession: 1925237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0025611	ResIII	PF04851.15	2.3e-26	1	2
MGP_C57BL6NJ_P0025611	ResIII	PF04851.15	2.3e-26	2	2
MGP_C57BL6NJ_P0025611	DEAD	PF00270.29	2.7e-53	1	2
MGP_C57BL6NJ_P0025611	DEAD	PF00270.29	2.7e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0025611	-	7477	XM_006512923	MGP_C57BL6NJ_P0025611	2198 (aa)	XP_006512986	E9PZJ8

Gene Model

Click here to download MGP_C57BL6NJ_G0017607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0017607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0017607	Ascc3	62	35.940	MGP_C57BL6NJ_G0030262	Hfm1	51	35.940
MGP_C57BL6NJ_G0017607	Ascc3	81	44.301	MGP_C57BL6NJ_G0026873	Snrnp200	86	42.051