EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0017745 (Gene tree)
Gene ID: -
Gene Symbol: Rab36
Alias: 6330593L16Rik|AW047545
Full Name: RAB36%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 18869 bases
Position: chr10:77842136-77861004
Accession: 1924127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0026163	MMR_HSR1	PF01926.23	8.7e-06	1	1
MGP_C57BL6NJ_P0026164	MMR_HSR1	PF01926.23	8.7e-06	1	1
MGP_C57BL6NJ_P0026168	MMR_HSR1	PF01926.23	8.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0026163	-	3291	-	MGP_C57BL6NJ_P0026163	267 (aa)	-	-
MGP_C57BL6NJ_T0026162	-	952	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0026167	-	576	-	MGP_C57BL6NJ_P0026167	134 (aa)	-	-
MGP_C57BL6NJ_T0026166	-	433	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0026165	-	2994	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0026164	-	2641	-	MGP_C57BL6NJ_P0026164	267 (aa)	-	-
MGP_C57BL6NJ_T0026169	-	772	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0026168	-	2952	-	MGP_C57BL6NJ_P0026168	267 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0017745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0017745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0017745	Rab36	64	37.427	MGP_C57BL6NJ_G0026068	Rab14	77	40.171
MGP_C57BL6NJ_G0017745	Rab36	80	36.620	MGP_C57BL6NJ_G0035686	Rab6b	94	36.620
MGP_C57BL6NJ_G0017745	Rab36	62	38.554	MGP_C57BL6NJ_G0030405	Rab35	97	33.649
MGP_C57BL6NJ_G0017745	Rab36	77	30.244	MGP_C57BL6NJ_G0024293	Rab5a	91	30.244
MGP_C57BL6NJ_G0017745	Rab36	63	37.500	MGP_C57BL6NJ_G0028452	Rab2a	78	37.500
MGP_C57BL6NJ_G0017745	Rab36	79	33.649	MGP_C57BL6NJ_G0025106	Rab1b	97	33.649
MGP_C57BL6NJ_G0017745	Rab36	65	35.955	MGP_C57BL6NJ_G0036600	Rab9b	50	42.000
MGP_C57BL6NJ_G0017745	Rab36	69	38.172	MGP_C57BL6NJ_G0016293	Rab23	77	38.172
MGP_C57BL6NJ_G0017745	Rab36	60	33.750	MGP_C57BL6NJ_G0024539	Rab18	56	38.793
MGP_C57BL6NJ_G0017745	Rab36	67	32.447	MGP_C57BL6NJ_G0036192	Rab33a	51	36.885
MGP_C57BL6NJ_G0017745	Rab36	60	35.625	MGP_C57BL6NJ_G0019558	Rab5c	73	35.625
MGP_C57BL6NJ_G0017745	Rab36	62	32.121	MGP_C57BL6NJ_G0027382	Rab22a	84	32.121
MGP_C57BL6NJ_G0017745	Rab36	63	36.571	MGP_C57BL6NJ_G0031441	Rab7	92	43.333
MGP_C57BL6NJ_G0017745	Rab36	61	36.196	MGP_C57BL6NJ_G0019764	Rab37	74	36.196
MGP_C57BL6NJ_G0017745	Rab36	58	33.758	MGP_C57BL6NJ_G0032029	Rasl2-9	70	33.758
MGP_C57BL6NJ_G0017745	Rab36	62	34.940	MGP_C57BL6NJ_G0036361	Rab39b	77	34.940
MGP_C57BL6NJ_G0017745	Rab36	61	38.272	MGP_C57BL6NJ_G0032997	Rab30	78	38.272
MGP_C57BL6NJ_G0017745	Rab36	79	33.175	MGP_C57BL6NJ_G0018457	Rab1a	95	33.175
MGP_C57BL6NJ_G0017745	Rab36	79	34.123	MGP_C57BL6NJ_G0023942	Rab11b	94	34.123
MGP_C57BL6NJ_G0017745	Rab36	55	30.201	MGP_C57BL6NJ_G0033708	Hras	83	30.625
MGP_C57BL6NJ_G0017745	Rab36	74	32.663	MGP_C57BL6NJ_G0020255	Rab15	92	32.663
MGP_C57BL6NJ_G0017745	Rab36	83	58.559	MGP_C57BL6NJ_G0019159	Rab34	86	58.559
MGP_C57BL6NJ_G0017745	Rab36	61	37.654	MGP_C57BL6NJ_G0021694	Rab2b	79	38.710
MGP_C57BL6NJ_G0017745	Rab36	61	34.132	MGP_C57BL6NJ_G0027616	Rab33b	54	37.903
MGP_C57BL6NJ_G0017745	Rab36	68	38.122	MGP_C57BL6NJ_G0027819	Rab25	54	43.590
MGP_C57BL6NJ_G0017745	Rab36	59	32.716	MGP_C57BL6NJ_G0036753	Rab9	79	31.677
MGP_C57BL6NJ_G0017745	Rab36	79	35.780	MGP_C57BL6NJ_G0035435	Rab11a	94	35.780
MGP_C57BL6NJ_G0017745	Rab36	58	32.692	MGP_C57BL6NJ_G0030553	Ran	89	32.692
MGP_C57BL6NJ_G0017745	Rab36	80	36.150	MGP_C57BL6NJ_G0033057	Rab6a	94	36.150