EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0017857 (Gene tree)
Gene ID
-
Gene Symbol
Ptbp1
Alias
AA407203|AL033359|HNRPI|PTB-1|PTB2|PTB3|PTB4|Ptb|hnRNP I|pPTB
Full Name
polypyrimidine tract binding protein 1
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Plus strand
Length
11002 bases
Position
chr10:83184611-83195612
Accession
97791
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0026522RRM_5PF13893.66.1e-6314
MGP_C57BL6NJ_P0026522RRM_5PF13893.66.1e-6324
MGP_C57BL6NJ_P0026522RRM_5PF13893.66.1e-6334
MGP_C57BL6NJ_P0026522RRM_5PF13893.66.1e-6344
MGP_C57BL6NJ_P0026520RRM_5PF13893.68.1e-6314
MGP_C57BL6NJ_P0026520RRM_5PF13893.68.1e-6324
MGP_C57BL6NJ_P0026520RRM_5PF13893.68.1e-6334
MGP_C57BL6NJ_P0026520RRM_5PF13893.68.1e-6344
MGP_C57BL6NJ_P0026529RRM_5PF13893.62.3e-6213
MGP_C57BL6NJ_P0026529RRM_5PF13893.62.3e-6223
MGP_C57BL6NJ_P0026529RRM_5PF13893.62.3e-6233
MGP_C57BL6NJ_P0026522RRM_1PF00076.226.3e-3913
MGP_C57BL6NJ_P0026522RRM_1PF00076.226.3e-3923
MGP_C57BL6NJ_P0026522RRM_1PF00076.226.3e-3933
MGP_C57BL6NJ_P0026520RRM_1PF00076.228.5e-3913
MGP_C57BL6NJ_P0026520RRM_1PF00076.228.5e-3923
MGP_C57BL6NJ_P0026520RRM_1PF00076.228.5e-3933
MGP_C57BL6NJ_P0026529RRM_1PF00076.225.3e-3613
MGP_C57BL6NJ_P0026529RRM_1PF00076.225.3e-3623
MGP_C57BL6NJ_P0026529RRM_1PF00076.225.3e-3633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0026535-693--- (aa)--
MGP_C57BL6NJ_T0026536-2093--- (aa)--
MGP_C57BL6NJ_T0026530-375-MGP_C57BL6NJ_P002653055 (aa)--
MGP_C57BL6NJ_T0026531-319-MGP_C57BL6NJ_P0026531106 (aa)--
MGP_C57BL6NJ_T0026532-744--- (aa)--
MGP_C57BL6NJ_T0026533-848-MGP_C57BL6NJ_P0026533162 (aa)--
MGP_C57BL6NJ_T0026529-2583-MGP_C57BL6NJ_P0026529489 (aa)--
MGP_C57BL6NJ_T0026528-385-MGP_C57BL6NJ_P002652862 (aa)--
MGP_C57BL6NJ_T0026523-2369--- (aa)--
MGP_C57BL6NJ_T0026522-3154-MGP_C57BL6NJ_P0026522529 (aa)--
MGP_C57BL6NJ_T0026521-950--- (aa)--
MGP_C57BL6NJ_T0026520-3095-MGP_C57BL6NJ_P0026520555 (aa)-E9PZ39
MGP_C57BL6NJ_T0026527-369--- (aa)--
MGP_C57BL6NJ_T0026526-389-MGP_C57BL6NJ_P0026526113 (aa)--
MGP_C57BL6NJ_T0026525-1765-MGP_C57BL6NJ_P0026525353 (aa)--
MGP_C57BL6NJ_T0026524-657--- (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0017857's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0017857's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0017857Ptbp110078.136MGP_C57BL6NJ_G0028757Ptbp310077.379
MGP_C57BL6NJ_G0017857Ptbp18030.583MGP_C57BL6NJ_G0032411Hnrnpl9530.045
MGP_C57BL6NJ_G0017857Ptbp110073.048MGP_C57BL6NJ_G0028242Ptbp210072.903

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