EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0017954 (Gene tree)
Gene ID: -
Gene Symbol: Celf5
Alias: 4930565A21Rik|Brunol5
Full Name: CUGBP%2C Elav-like family member 5
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 25079 bases
Position: chr10:85001585-85026663
Accession: 2442333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0026930	RRM_1	PF00076.22	1.5e-50	1	3
MGP_C57BL6NJ_P0026930	RRM_1	PF00076.22	1.5e-50	2	3
MGP_C57BL6NJ_P0026930	RRM_1	PF00076.22	1.5e-50	3	3
MGP_C57BL6NJ_P0026934	RRM_1	PF00076.22	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0026930	-	4329	XM_006513743	MGP_C57BL6NJ_P0026930	446 (aa)	XP_006513806	D3Z4C5
MGP_C57BL6NJ_T0026931	-	605	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0026932	-	945	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0026933	-	748	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0026934	-	442	-	MGP_C57BL6NJ_P0026934	92 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0017954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0017954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0017954	Celf5	65	38.710	MGP_C57BL6NJ_G0029162	Pabpc4	53	38.710
MGP_C57BL6NJ_G0017954	Celf5	98	38.554	MGP_C57BL6NJ_G0024778	Pabpc2	63	38.554
MGP_C57BL6NJ_G0017954	Celf5	97	30.857	MGP_C57BL6NJ_G0028865	Elavl2	97	30.857
MGP_C57BL6NJ_G0017954	Celf5	78	36.250	MGP_C57BL6NJ_G0018243	Rbms2	77	36.250
MGP_C57BL6NJ_G0017954	Celf5	93	59.770	MGP_C57BL6NJ_G0025747	Celf2	92	53.659
MGP_C57BL6NJ_G0017954	Celf5	71	39.759	MGP_C57BL6NJ_G0022203	Pabpc1	52	39.759
MGP_C57BL6NJ_G0017954	Celf5	93	76.842	MGP_C57BL6NJ_G0024616	Celf4	97	65.795
MGP_C57BL6NJ_G0017954	Celf5	91	31.765	MGP_C57BL6NJ_G0034964	Elavl3	78	38.272
MGP_C57BL6NJ_G0017954	Celf5	89	32.184	MGP_C57BL6NJ_G0031411	Tia1	88	34.568
MGP_C57BL6NJ_G0017954	Celf5	57	42.105	MGP_C57BL6NJ_G0035900	Rbms3	93	36.134
MGP_C57BL6NJ_G0017954	Celf5	70	32.812	MGP_C57BL6NJ_G0027257	Pabpc1l	63	35.870
MGP_C57BL6NJ_G0017954	Celf5	93	76.744	MGP_C57BL6NJ_G0027972	Celf3	100	66.848
MGP_C57BL6NJ_G0017954	Celf5	66	34.426	MGP_C57BL6NJ_G0036541	Pabpc5	70	35.955
MGP_C57BL6NJ_G0017954	Celf5	93	56.322	MGP_C57BL6NJ_G0026558	Celf1	98	44.650
MGP_C57BL6NJ_G0017954	Celf5	57	32.407	MGP_C57BL6NJ_G0022381	Puf60	81	32.407
MGP_C57BL6NJ_G0017954	Celf5	88	34.524	MGP_C57BL6NJ_G0028025	Sf3b4	79	30.625
MGP_C57BL6NJ_G0017954	Celf5	59	41.975	MGP_C57BL6NJ_G0033826	Elavl1	79	41.975
MGP_C57BL6NJ_G0017954	Celf5	89	30.120	MGP_C57BL6NJ_G0028998	Elavl4	74	37.500
MGP_C57BL6NJ_G0017954	Celf5	93	80.645	MGP_C57BL6NJ_G0035394	Celf6	75	84.783