EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0018030 (Gene tree)
Gene ID: -
Gene Symbol: Arl1
Alias: 2310008D22Rik|AU019749
Full Name: ADP-ribosylation factor-like 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 14831 bases
Position: chr10:92856558-92871388
Accession: 99436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0027219	MMR_HSR1	PF01926.23	6.1e-05	1	1
MGP_C57BL6NJ_P0027218	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0027217	-	575	-	MGP_C57BL6NJ_P0027217	52 (aa)	-	P61211
MGP_C57BL6NJ_T0027218	-	1924	-	MGP_C57BL6NJ_P0027218	181 (aa)	-	-
MGP_C57BL6NJ_T0027219	-	622	-	MGP_C57BL6NJ_P0027219	138 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0018030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0018030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0018030	Arl1	99	38.406	MGP_C57BL6NJ_G0021842	Arl11	89	39.103
MGP_C57BL6NJ_G0018030	Arl1	83	30.579	MGP_C57BL6NJ_G0020255	Rab15	56	30.579
MGP_C57BL6NJ_G0018030	Arl1	99	53.285	MGP_C57BL6NJ_G0026151	Arl5a	87	50.641
MGP_C57BL6NJ_G0018030	Arl1	100	61.594	MGP_C57BL6NJ_G0018785	Arf1	86	59.615
MGP_C57BL6NJ_G0018030	Arl1	100	60.870	MGP_C57BL6NJ_G0019663	Arf2	86	58.974
MGP_C57BL6NJ_G0018030	Arl1	100	50.000	MGP_C57BL6NJ_G0025625	Arl3	85	48.387
MGP_C57BL6NJ_G0018030	Arl1	99	48.175	MGP_C57BL6NJ_G0019440	Arl5c	88	45.223
MGP_C57BL6NJ_G0018030	Arl1	99	54.015	MGP_C57BL6NJ_G0025781	Arl5b	91	51.613
MGP_C57BL6NJ_G0018030	Arl1	95	37.500	MGP_C57BL6NJ_G0019601	Arl4d	80	35.625
MGP_C57BL6NJ_G0018030	Arl1	94	33.880	MGP_C57BL6NJ_G0027441	Arfrp1	79	41.837
MGP_C57BL6NJ_G0018030	Arl1	100	61.594	MGP_C57BL6NJ_G0022719	Arf3	86	59.615
MGP_C57BL6NJ_G0018030	Arl1	100	45.652	MGP_C57BL6NJ_G0025163	Arl2	82	45.695
MGP_C57BL6NJ_G0018030	Arl1	92	30.709	MGP_C57BL6NJ_G0017681	Sar1a	64	30.709
MGP_C57BL6NJ_G0018030	Arl1	79	36.036	MGP_C57BL6NJ_G0020955	Arl10	53	36.036
MGP_C57BL6NJ_G0018030	Arl1	95	41.912	MGP_C57BL6NJ_G0020090	Arl4a	81	40.123
MGP_C57BL6NJ_G0018030	Arl1	95	44.853	MGP_C57BL6NJ_G0016684	Arl4c	84	41.358
MGP_C57BL6NJ_G0018030	Arl1	82	32.000	MGP_C57BL6NJ_G0027382	Rab22a	61	33.071
MGP_C57BL6NJ_G0018030	Arl1	98	33.824	MGP_C57BL6NJ_G0016921	Arl8a	82	32.237
MGP_C57BL6NJ_G0018030	Arl1	99	40.714	MGP_C57BL6NJ_G0027713	Arl14	83	38.994
MGP_C57BL6NJ_G0018030	Arl1	100	35.915	MGP_C57BL6NJ_G0023350	Arl6	86	36.250
MGP_C57BL6NJ_G0018030	Arl1	98	33.088	MGP_C57BL6NJ_G0031541	Arl8b	82	31.579
MGP_C57BL6NJ_G0018030	Arl1	100	63.043	MGP_C57BL6NJ_G0030945	Arf5	87	60.256