EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0018601 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 10150 bases
Position: chr11:49334616-49344765
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0029183	MMR_HSR1	PF01926.23	5.7e-05	1	1
MGP_C57BL6NJ_P0029182	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0029181	-	3832	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0029182	-	2259	-	MGP_C57BL6NJ_P0029182	409 (aa)	-	-
MGP_C57BL6NJ_T0029183	-	1213	-	MGP_C57BL6NJ_P0029183	288 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0018601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0018601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0018601	Irgm1	86	34.118	MGP_C57BL6NJ_G0024871	Gm4841	89	31.989
MGP_C57BL6NJ_G0018601	Irgm1	79	36.864	MGP_C57BL6NJ_G0024870	Gm4951	77	33.013
MGP_C57BL6NJ_G0018601	Irgm1	93	33.696	MGP_C57BL6NJ_G0024873	Iigp1	79	32.515
MGP_C57BL6NJ_G0018601	Irgm1	75	33.028	MGP_C57BL6NJ_G0024872	F830016B08Rik	78	33.028
MGP_C57BL6NJ_G0018601	Irgm1	76	35.169	MGP_C57BL6NJ_G0032276	Irgc1	71	30.183
MGP_C57BL6NJ_G0018601	Irgm1	89	56.031	MGP_C57BL6NJ_G0018737	Igtp	90	50.000
MGP_C57BL6NJ_G0018601	Irgm1	83	60.084	MGP_C57BL6NJ_G0018738	Irgm2	92	49.057
MGP_C57BL6NJ_G0018601	Irgm1	89	31.937	MGP_C57BL6NJ_G0018606	Ifi47	91	31.937