EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0018606 (Gene tree)
Gene ID: -
Gene Symbol: Ifi47
Alias: 47kDa|IRG-47|IRG-47GN|Ifggc1|Igrd|Iigp4|Iipg4|Irgd
Full Name: interferon gamma inducible protein 47
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 21797 bases
Position: chr11:49583763-49605559
Accession: 99448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0029190	MMR_HSR1	PF01926.23	2e-06	1	1
MGP_C57BL6NJ_P0029193	MMR_HSR1	PF01926.23	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0029193	-	1690	-	MGP_C57BL6NJ_P0029193	420 (aa)	-	-
MGP_C57BL6NJ_T0029191	-	703	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0029190	-	1766	-	MGP_C57BL6NJ_P0029190	420 (aa)	-	Q61635

Gene Model

Click here to download MGP_C57BL6NJ_G0018606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0018606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0018606	Ifi47	90	39.050	MGP_C57BL6NJ_G0024872	F830016B08Rik	90	39.050
MGP_C57BL6NJ_G0018606	Ifi47	75	41.401	MGP_C57BL6NJ_G0032276	Irgc1	68	41.401
MGP_C57BL6NJ_G0018606	Ifi47	73	33.766	MGP_C57BL6NJ_G0018738	Irgm2	74	33.766
MGP_C57BL6NJ_G0018606	Ifi47	91	31.937	MGP_C57BL6NJ_G0018601	Irgm1	89	31.937
MGP_C57BL6NJ_G0018606	Ifi47	95	40.000	MGP_C57BL6NJ_G0024870	Gm4951	96	40.000
MGP_C57BL6NJ_G0018606	Ifi47	99	36.779	MGP_C57BL6NJ_G0024871	Gm4841	99	36.779
MGP_C57BL6NJ_G0018606	Ifi47	90	41.161	MGP_C57BL6NJ_G0024873	Iigp1	91	41.161
MGP_C57BL6NJ_G0018606	Ifi47	89	32.031	MGP_C57BL6NJ_G0018737	Igtp	86	32.208