EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0018653 (Gene tree)
Gene ID: -
Gene Symbol: Zfp354a
Alias: AW488485|Tcf17|Znf354a|kid1
Full Name: zinc finger protein 354A
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 14531 bases
Position: chr11:51793784-51808314
Accession: 103172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	1	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	2	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	3	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	4	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	5	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	6	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	7	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	8	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	9	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	10	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	11	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	12	13
MGP_C57BL6NJ_P0029362	zf-C2H2	PF00096.26	6.3e-67	13	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	1	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	2	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	3	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	4	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	5	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	6	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	7	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	8	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	9	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	10	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	11	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	12	13
MGP_C57BL6NJ_P0029360	zf-C2H2	PF00096.26	6.5e-67	13	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	1	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	2	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	3	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	4	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	5	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	6	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	7	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	8	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	9	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	10	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	11	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	12	13
MGP_C57BL6NJ_P0029364	zf-C2H2	PF00096.26	6.5e-67	13	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	1	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	2	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	3	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	4	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	5	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	6	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	7	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	8	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	9	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	10	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	11	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	12	13
MGP_C57BL6NJ_P0029363	zf-C2H2	PF00096.26	6.7e-67	13	13
MGP_C57BL6NJ_P0029362	zf-met	PF12874.7	5.1e-06	1	1
MGP_C57BL6NJ_P0029360	zf-met	PF12874.7	5.1e-06	1	1
MGP_C57BL6NJ_P0029364	zf-met	PF12874.7	5.1e-06	1	1
MGP_C57BL6NJ_P0029363	zf-met	PF12874.7	5.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0029360	-	2592	XM_006532787	MGP_C57BL6NJ_P0029360	572 (aa)	XP_006532850	Q61751
MGP_C57BL6NJ_T0029361	-	430	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0029362	-	4165	-	MGP_C57BL6NJ_P0029362	571 (aa)	-	-
MGP_C57BL6NJ_T0029363	-	2078	-	MGP_C57BL6NJ_P0029363	573 (aa)	-	-
MGP_C57BL6NJ_T0029364	-	1719	-	MGP_C57BL6NJ_P0029364	572 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0018653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0018653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0018653	Zfp354a	98	53.498	MGP_C57BL6NJ_G0026884	Zfp661	95	53.498
MGP_C57BL6NJ_G0018653	Zfp354a	69	43.953	MGP_C57BL6NJ_G0029473	Zbtb17	56	40.947
MGP_C57BL6NJ_G0018653	Zfp354a	78	51.385	MGP_C57BL6NJ_G0034261	Zfp709	88	51.385
MGP_C57BL6NJ_G0018653	Zfp354a	98	47.674	MGP_C57BL6NJ_G0034262	Zfp882	99	47.674
MGP_C57BL6NJ_G0018653	Zfp354a	69	42.308	MGP_C57BL6NJ_G0027353	Zfp64	70	33.753
MGP_C57BL6NJ_G0018653	Zfp354a	70	40.000	MGP_C57BL6NJ_G0018741	Zfp672	99	42.500
MGP_C57BL6NJ_G0018653	Zfp354a	98	44.898	MGP_C57BL6NJ_G0018791	Zfp867	96	48.986
MGP_C57BL6NJ_G0018653	Zfp354a	77	51.462	MGP_C57BL6NJ_G0031616	Zfp637	86	51.462
MGP_C57BL6NJ_G0018653	Zfp354a	100	51.646	MGP_C57BL6NJ_G0034908	Zfp26	91	51.646
MGP_C57BL6NJ_G0018653	Zfp354a	72	39.688	MGP_C57BL6NJ_G0031136	Repin1	95	36.053
MGP_C57BL6NJ_G0018653	Zfp354a	98	46.667	MGP_C57BL6NJ_G0032271	Zfp94	99	45.669
MGP_C57BL6NJ_G0018653	Zfp354a	69	56.667	MGP_C57BL6NJ_G0020666	Zkscan4	61	56.667
MGP_C57BL6NJ_G0018653	Zfp354a	68	56.471	MGP_C57BL6NJ_G0033526	Zfp768	55	50.000
MGP_C57BL6NJ_G0018653	Zfp354a	99	46.748	MGP_C57BL6NJ_G0033528	E430018J23Rik	89	46.748
MGP_C57BL6NJ_G0018653	Zfp354a	71	43.369	MGP_C57BL6NJ_G0033529	Zfp747	70	43.369
MGP_C57BL6NJ_G0018653	Zfp354a	68	45.122	MGP_C57BL6NJ_G0030274	Gfi1	100	48.031
MGP_C57BL6NJ_G0018653	Zfp354a	79	43.814	MGP_C57BL6NJ_G0030303	4930522L14Rik	99	42.745
MGP_C57BL6NJ_G0018653	Zfp354a	100	47.859	MGP_C57BL6NJ_G0032591	Zfp715	96	47.859
MGP_C57BL6NJ_G0018653	Zfp354a	98	47.870	MGP_C57BL6NJ_G0021088	Zfp759	99	47.870
MGP_C57BL6NJ_G0018653	Zfp354a	99	51.948	MGP_C57BL6NJ_G0021087	Rslcan18	83	51.948
MGP_C57BL6NJ_G0018653	Zfp354a	89	47.312	MGP_C57BL6NJ_G0025014	Zfp236	64	48.148
MGP_C57BL6NJ_G0018653	Zfp354a	69	37.037	MGP_C57BL6NJ_G0032301	Zfp574	93	38.010
MGP_C57BL6NJ_G0018653	Zfp354a	98	48.413	MGP_C57BL6NJ_G0034971	Zfp872	99	48.072
MGP_C57BL6NJ_G0018653	Zfp354a	72	56.675	MGP_C57BL6NJ_G0032439	Zfp420	99	55.918
MGP_C57BL6NJ_G0018653	Zfp354a	73	47.458	MGP_C57BL6NJ_G0032019	Zfp865	82	33.191
MGP_C57BL6NJ_G0018653	Zfp354a	69	49.738	MGP_C57BL6NJ_G0032011	Zfp628	60	48.810
MGP_C57BL6NJ_G0018653	Zfp354a	98	49.052	MGP_C57BL6NJ_G0032266	Zfp235	99	48.115
MGP_C57BL6NJ_G0018653	Zfp354a	98	50.209	MGP_C57BL6NJ_G0032267	Zfp111	99	51.499
MGP_C57BL6NJ_G0018653	Zfp354a	98	50.000	MGP_C57BL6NJ_G0032265	Zfp112	99	49.591
MGP_C57BL6NJ_G0018653	Zfp354a	74	38.418	MGP_C57BL6NJ_G0034479	Zfp319	86	40.000
MGP_C57BL6NJ_G0018653	Zfp354a	69	37.500	MGP_C57BL6NJ_G0016956	Zbtb41	63	37.500
MGP_C57BL6NJ_G0018653	Zfp354a	99	46.798	MGP_C57BL6NJ_G0023659	Zfp945	99	46.429
MGP_C57BL6NJ_G0018653	Zfp354a	100	50.693	MGP_C57BL6NJ_G0018644	Zfp454	100	48.066
MGP_C57BL6NJ_G0018653	Zfp354a	73	43.503	MGP_C57BL6NJ_G0031715	Zfp384	50	43.056
MGP_C57BL6NJ_G0018653	Zfp354a	77	39.286	MGP_C57BL6NJ_G0031270	Prdm5	85	36.000
MGP_C57BL6NJ_G0018653	Zfp354a	99	45.823	MGP_C57BL6NJ_G0027315	Zfp334	99	47.101
MGP_C57BL6NJ_G0018653	Zfp354a	98	42.525	MGP_C57BL6NJ_G0022420	Zfp251	95	48.603
MGP_C57BL6NJ_G0018653	Zfp354a	98	48.235	MGP_C57BL6NJ_G0023637	Zfp51	94	49.279
MGP_C57BL6NJ_G0018653	Zfp354a	99	46.537	MGP_C57BL6NJ_G0023635	Zfp677	99	48.551
MGP_C57BL6NJ_G0018653	Zfp354a	69	48.148	MGP_C57BL6NJ_G0032020	-	67	31.795
MGP_C57BL6NJ_G0018653	Zfp354a	98	51.709	MGP_C57BL6NJ_G0032270	Zfp61	98	51.709
MGP_C57BL6NJ_G0018653	Zfp354a	98	52.245	MGP_C57BL6NJ_G0034637	Zfp1	99	52.245
MGP_C57BL6NJ_G0018653	Zfp354a	98	44.055	MGP_C57BL6NJ_G0021105	Zfp748	99	48.555
MGP_C57BL6NJ_G0018653	Zfp354a	80	41.214	MGP_C57BL6NJ_G0023666	Zscan10	79	41.214
MGP_C57BL6NJ_G0018653	Zfp354a	74	48.454	MGP_C57BL6NJ_G0029938	Zbtb49	61	47.222