EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0018681 (Gene tree)
Gene ID: -
Gene Symbol: Aff4
Alias: AF5Q31|Alf4|Laf4l|MCEF
Full Name: AF4/FMR2 family%2C member 4
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 78085 bases
Position: chr11:54319664-54397748
Accession: 2136171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0029463	AF-4	PF05110.13	0	1	1
MGP_C57BL6NJ_P0029464	AF-4	PF05110.13	3.7e-47	1	1
MGP_C57BL6NJ_P0029467	AF-4	PF05110.13	6.5e-39	1	2
MGP_C57BL6NJ_P0029467	AF-4	PF05110.13	6.5e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0029469	-	687	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0029468	-	429	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0029463	-	10099	XM_006534560	MGP_C57BL6NJ_P0029463	1160 (aa)	XP_006534623	Q9ESC8
MGP_C57BL6NJ_T0029467	-	476	-	MGP_C57BL6NJ_P0029467	158 (aa)	-	-
MGP_C57BL6NJ_T0029466	-	600	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0029465	-	3818	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0029464	-	464	-	MGP_C57BL6NJ_P0029464	122 (aa)	-	-
MGP_C57BL6NJ_T0029470	-	933	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0018681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0018681	Aff4	74	57.143	MGP_C57BL6NJ_G0016341	Aff3	83	35.742
MGP_C57BL6NJ_G0018681	Aff4	94	54.074	MGP_C57BL6NJ_G0036274	Aff2	64	53.160