EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0018737 (Gene tree)
Gene ID: -
Gene Symbol: Igtp
Alias: AW558444|Irgm3
Full Name: interferon gamma induced GTPase
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 14498 bases
Position: chr11:59659628-59674125
Accession: 107729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0029683	MMR_HSR1	PF01926.23	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0029683	-	1815	-	MGP_C57BL6NJ_P0029683	423 (aa)	-	-
MGP_C57BL6NJ_T0029682	-	1590	-	MGP_C57BL6NJ_P0029682	53 (aa)	-	E9PW35
MGP_C57BL6NJ_T0029684	-	1657	-	MGP_C57BL6NJ_P0029684	72 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0018737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0018737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0018737	Igtp	68	33.775	MGP_C57BL6NJ_G0032276	Irgc1	65	33.775
MGP_C57BL6NJ_G0018737	Igtp	70	64.901	MGP_C57BL6NJ_G0018738	Irgm2	72	65.541
MGP_C57BL6NJ_G0018737	Igtp	67	32.441	MGP_C57BL6NJ_G0024873	Iigp1	72	32.323
MGP_C57BL6NJ_G0018737	Igtp	85	30.890	MGP_C57BL6NJ_G0024872	F830016B08Rik	88	30.789
MGP_C57BL6NJ_G0018737	Igtp	67	34.247	MGP_C57BL6NJ_G0024870	Gm4951	72	34.247
MGP_C57BL6NJ_G0018737	Igtp	90	50.000	MGP_C57BL6NJ_G0018601	Irgm1	89	56.031
MGP_C57BL6NJ_G0018737	Igtp	86	32.208	MGP_C57BL6NJ_G0018606	Ifi47	89	32.031