EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0018937 (Gene tree)
Gene ID: -
Gene Symbol: Eif4a1
Alias: BM-010|Ddx2a|Eif4|Eif4a|initiation factor eIF-4A long form
Full Name: eukaryotic translation initiation factor 4A1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 5583 bases
Position: chr11:72246701-72252283
Accession: 95303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0030472	ResIII	PF04851.15	1.3e-06	1	1
MGP_C57BL6NJ_P0030472	DEAD	PF00270.29	7.3e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0030483	-	802	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030482	-	453	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030481	-	401	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030480	-	484	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030478	-	403	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030479	-	493	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030472	-	1869	-	MGP_C57BL6NJ_P0030472	437 (aa)	-	-
MGP_C57BL6NJ_T0030473	-	3169	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030471	-	1847	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030476	-	753	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030477	-	813	-	MGP_C57BL6NJ_P0030477	50 (aa)	-	-
MGP_C57BL6NJ_T0030474	-	854	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030475	-	435	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0018937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0018937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0018937	Eif4a1	81	33.333	MGP_C57BL6NJ_G0022487	Ddx17	51	33.036
MGP_C57BL6NJ_G0018937	Eif4a1	86	31.538	MGP_C57BL6NJ_G0017699	Ddx50	54	32.258
MGP_C57BL6NJ_G0018937	Eif4a1	52	30.435	MGP_C57BL6NJ_G0018411	Ddx56	97	30.041
MGP_C57BL6NJ_G0018937	Eif4a1	84	30.189	MGP_C57BL6NJ_G0016945	Ddx59	57	30.726
MGP_C57BL6NJ_G0018937	Eif4a1	81	33.071	MGP_C57BL6NJ_G0017321	D1Pas1	56	33.333
MGP_C57BL6NJ_G0018937	Eif4a1	82	31.622	MGP_C57BL6NJ_G0019255	Ddx52	60	31.944
MGP_C57BL6NJ_G0018937	Eif4a1	100	61.785	MGP_C57BL6NJ_G0019870	Eif4a3	99	61.327
MGP_C57BL6NJ_G0018937	Eif4a1	81	32.143	MGP_C57BL6NJ_G0035558	Ddx43	56	32.514
MGP_C57BL6NJ_G0018937	Eif4a1	81	31.267	MGP_C57BL6NJ_G0030529	Ddx55	58	30.556
MGP_C57BL6NJ_G0018937	Eif4a1	75	67.976	MGP_C57BL6NJ_G0031330	Gm5580	85	67.976
MGP_C57BL6NJ_G0018937	Eif4a1	75	67.976	MGP_C57BL6NJ_G0031331	Gm8994	85	67.976
MGP_C57BL6NJ_G0018937	Eif4a1	83	36.612	MGP_C57BL6NJ_G0034335	Ddx39	84	39.655
MGP_C57BL6NJ_G0018937	Eif4a1	80	31.129	MGP_C57BL6NJ_G0020986	Ddx41	55	30.523
MGP_C57BL6NJ_G0018937	Eif4a1	84	37.166	MGP_C57BL6NJ_G0024038	Ddx39b	99	38.776
MGP_C57BL6NJ_G0018937	Eif4a1	82	33.333	MGP_C57BL6NJ_G0034195	Ddx49	74	33.708
MGP_C57BL6NJ_G0018937	Eif4a1	79	41.341	MGP_C57BL6NJ_G0034625	Ddx19a	74	41.341
MGP_C57BL6NJ_G0018937	Eif4a1	79	41.828	MGP_C57BL6NJ_G0034626	Ddx19b	74	41.828
MGP_C57BL6NJ_G0018937	Eif4a1	88	31.688	MGP_C57BL6NJ_G0031854	Ddx47	91	30.645
MGP_C57BL6NJ_G0018937	Eif4a1	99	72.477	MGP_C57BL6NJ_G0023094	Eif4a2	98	75.910
MGP_C57BL6NJ_G0018937	Eif4a1	81	43.207	MGP_C57BL6NJ_G0035026	Ddx25	74	43.207
MGP_C57BL6NJ_G0018937	Eif4a1	81	33.154	MGP_C57BL6NJ_G0019705	Ddx5	78	31.498
MGP_C57BL6NJ_G0018937	Eif4a1	80	33.333	MGP_C57BL6NJ_G0036071	Ddx3x	56	33.333