EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0018977 (Gene tree)
Gene ID: -
Gene Symbol: Bcl6b
Alias: Bazf
Full Name: B cell CLL/lymphoma 6%2C member B
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 5671 bases
Position: chr11:72842769-72848439
Accession: 1278332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0030671	zf-C2H2	PF00096.26	6.9e-16	1	2
MGP_C57BL6NJ_P0030671	zf-C2H2	PF00096.26	6.9e-16	2	2
MGP_C57BL6NJ_P0030671	zf-met	PF12874.7	9.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0030671	-	3366	-	MGP_C57BL6NJ_P0030671	474 (aa)	-	O88282
MGP_C57BL6NJ_T0030672	-	384	-	MGP_C57BL6NJ_P0030672	116 (aa)	-	-
MGP_C57BL6NJ_T0030673	-	652	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0018977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0018977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0018977	Bcl6b	56	49.645	MGP_C57BL6NJ_G0027540	Mynn	86	49.645
MGP_C57BL6NJ_G0018977	Bcl6b	54	47.368	MGP_C57BL6NJ_G0029938	Zbtb49	60	45.714
MGP_C57BL6NJ_G0018977	Bcl6b	51	46.809	MGP_C57BL6NJ_G0020666	Zkscan4	70	46.809
MGP_C57BL6NJ_G0018977	Bcl6b	97	34.483	MGP_C57BL6NJ_G0026112	Zbtb6	97	34.483
MGP_C57BL6NJ_G0018977	Bcl6b	93	41.121	MGP_C57BL6NJ_G0024402	Zbtb14	89	37.288
MGP_C57BL6NJ_G0018977	Bcl6b	62	47.059	MGP_C57BL6NJ_G0023637	Zfp51	81	46.617
MGP_C57BL6NJ_G0018977	Bcl6b	50	48.148	MGP_C57BL6NJ_G0021088	Zfp759	89	48.148
MGP_C57BL6NJ_G0018977	Bcl6b	68	45.312	MGP_C57BL6NJ_G0029473	Zbtb17	74	44.444
MGP_C57BL6NJ_G0018977	Bcl6b	96	32.692	MGP_C57BL6NJ_G0021364	Zfp131	50	36.667
MGP_C57BL6NJ_G0018977	Bcl6b	94	40.299	MGP_C57BL6NJ_G0017570	Zbtb24	71	37.640
MGP_C57BL6NJ_G0018977	Bcl6b	96	52.713	MGP_C57BL6NJ_G0023104	Bcl6	69	52.756