EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019012 (Gene tree)
Gene ID: -
Gene Symbol: Dhx33
Alias: 3110057P17Rik|9430096J02Rik|Ddx33
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 33
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 20149 bases
Position: chr11:73727724-73747872
Accession: 2445102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0030853	DEAD	PF00270.29	2.3e-06	1	1
MGP_C57BL6NJ_P0030855	HA2	PF04408.23	1e-20	1	1
MGP_C57BL6NJ_P0030853	HA2	PF04408.23	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0030860	-	2687	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030854	-	1422	-	MGP_C57BL6NJ_P0030854	105 (aa)	-	-
MGP_C57BL6NJ_T0030855	-	1835	-	MGP_C57BL6NJ_P0030855	474 (aa)	-	-
MGP_C57BL6NJ_T0030856	-	2266	-	MGP_C57BL6NJ_P0030856	81 (aa)	-	-
MGP_C57BL6NJ_T0030857	-	3474	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0030853	-	5184	-	MGP_C57BL6NJ_P0030853	698 (aa)	-	Q80VY9
MGP_C57BL6NJ_T0030858	-	565	-	MGP_C57BL6NJ_P0030858	47 (aa)	-	-
MGP_C57BL6NJ_T0030859	-	750	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0019012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019012	Dhx33	92	30.781	MGP_C57BL6NJ_G0031352	Dqx1	91	30.781
MGP_C57BL6NJ_G0019012	Dhx33	93	46.472	MGP_C57BL6NJ_G0024060	Dhx16	61	46.472
MGP_C57BL6NJ_G0019012	Dhx33	98	42.979	MGP_C57BL6NJ_G0027225	Dhx35	97	42.877
MGP_C57BL6NJ_G0019012	Dhx33	90	41.699	MGP_C57BL6NJ_G0030541	Dhx37	61	41.667
MGP_C57BL6NJ_G0019012	Dhx33	92	42.553	MGP_C57BL6NJ_G0029974	Dhx15	83	42.664
MGP_C57BL6NJ_G0019012	Dhx33	90	47.068	MGP_C57BL6NJ_G0019602	Dhx8	53	47.068
MGP_C57BL6NJ_G0019012	Dhx33	90	44.164	MGP_C57BL6NJ_G0034599	Dhx38	51	44.164
MGP_C57BL6NJ_G0019012	Dhx33	77	31.000	MGP_C57BL6NJ_G0020532	Tdrd9	95	32.448
MGP_C57BL6NJ_G0019012	Dhx33	86	36.816	MGP_C57BL6NJ_G0027678	Dhx36	63	36.816
MGP_C57BL6NJ_G0019012	Dhx33	89	37.348	MGP_C57BL6NJ_G0019287	Dhx40	99	32.766