EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019159 (Gene tree)
Gene ID: -
Gene Symbol: Rab34
Alias: AI326479|Narr|Rah|Rah1
Full Name: RAB34%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 4686 bases
Position: chr11:81641660-81646345
Accession: 104606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0031433	MMR_HSR1	PF01926.23	1.1e-06	1	1
MGP_C57BL6NJ_P0031430	MMR_HSR1	PF01926.23	1.2e-06	1	1
MGP_C57BL6NJ_P0031431	MMR_HSR1	PF01926.23	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0031435	-	352	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031434	-	880	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031431	-	1558	-	MGP_C57BL6NJ_P0031431	251 (aa)	-	-
MGP_C57BL6NJ_T0031430	-	795	XM_011248824	MGP_C57BL6NJ_P0031430	265 (aa)	-	A0A140LIX7
MGP_C57BL6NJ_T0031433	-	1135	-	MGP_C57BL6NJ_P0031433	259 (aa)	-	-
MGP_C57BL6NJ_T0031432	-	420	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0019159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019159's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019159	Rab34	86	58.559	MGP_C57BL6NJ_G0017745	Rab36	83	58.559
MGP_C57BL6NJ_G0019159	Rab34	60	36.306	MGP_C57BL6NJ_G0036361	Rab39b	73	36.306
MGP_C57BL6NJ_G0019159	Rab34	60	38.462	MGP_C57BL6NJ_G0016293	Rab23	64	38.462
MGP_C57BL6NJ_G0019159	Rab34	60	37.179	MGP_C57BL6NJ_G0024384	Rab31	78	37.179
MGP_C57BL6NJ_G0019159	Rab34	62	31.875	MGP_C57BL6NJ_G0019558	Rab5c	73	31.875
MGP_C57BL6NJ_G0019159	Rab34	62	35.625	MGP_C57BL6NJ_G0032997	Rab30	77	35.625
MGP_C57BL6NJ_G0019159	Rab34	61	30.519	MGP_C57BL6NJ_G0027819	Rab25	68	30.519
MGP_C57BL6NJ_G0019159	Rab34	64	35.152	MGP_C57BL6NJ_G0028452	Rab2a	76	35.152
MGP_C57BL6NJ_G0019159	Rab34	77	33.023	MGP_C57BL6NJ_G0024393	Rab12	73	33.023
MGP_C57BL6NJ_G0019159	Rab34	62	40.491	MGP_C57BL6NJ_G0018457	Rab1a	77	40.491
MGP_C57BL6NJ_G0019159	Rab34	72	37.634	MGP_C57BL6NJ_G0033057	Rab6a	85	37.634
MGP_C57BL6NJ_G0019159	Rab34	80	31.731	MGP_C57BL6NJ_G0019764	Rab37	89	31.731
MGP_C57BL6NJ_G0019159	Rab34	62	40.373	MGP_C57BL6NJ_G0025106	Rab1b	79	40.373
MGP_C57BL6NJ_G0019159	Rab34	79	35.610	MGP_C57BL6NJ_G0030405	Rab35	96	35.610
MGP_C57BL6NJ_G0019159	Rab34	69	34.066	MGP_C57BL6NJ_G0026068	Rab14	89	39.855
MGP_C57BL6NJ_G0019159	Rab34	55	31.690	MGP_C57BL6NJ_G0029786	Rheb	73	31.690
MGP_C57BL6NJ_G0019159	Rab34	68	36.667	MGP_C57BL6NJ_G0035686	Rab6b	85	36.667
MGP_C57BL6NJ_G0019159	Rab34	62	30.061	MGP_C57BL6NJ_G0032029	Rasl2-9	71	30.769
MGP_C57BL6NJ_G0019159	Rab34	62	35.000	MGP_C57BL6NJ_G0021694	Rab2b	78	35.714
MGP_C57BL6NJ_G0019159	Rab34	62	32.500	MGP_C57BL6NJ_G0024293	Rab5a	73	32.500
MGP_C57BL6NJ_G0019159	Rab34	70	33.880	MGP_C57BL6NJ_G0023942	Rab11b	78	41.026
MGP_C57BL6NJ_G0019159	Rab34	62	33.750	MGP_C57BL6NJ_G0027382	Rab22a	81	33.750
MGP_C57BL6NJ_G0019159	Rab34	53	41.135	MGP_C57BL6NJ_G0036192	Rab33a	59	41.135
MGP_C57BL6NJ_G0019159	Rab34	64	35.928	MGP_C57BL6NJ_G0020255	Rab15	77	35.928