EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019287 (Gene tree)
Gene ID: -
Gene Symbol: Dhx40
Alias: 2410016C14Rik|ARG147|DDX40|PAD
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 40
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 43100 bases
Position: chr11:91007542-91050641
Accession: 1914737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0031928	DEAD	PF00270.29	7.1e-09	1	1
MGP_C57BL6NJ_P0031929	HA2	PF04408.23	3e-15	1	1
MGP_C57BL6NJ_P0031928	HA2	PF04408.23	6.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0031930	-	641	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031931	-	626	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031929	-	912	-	MGP_C57BL6NJ_P0031929	304 (aa)	-	-
MGP_C57BL6NJ_T0031928	-	3789	-	MGP_C57BL6NJ_P0031928	779 (aa)	-	Q6PE54

Gene Model

Click here to download MGP_C57BL6NJ_G0019287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019287	Dhx40	90	35.262	MGP_C57BL6NJ_G0027225	Dhx35	99	35.262
MGP_C57BL6NJ_G0019287	Dhx40	83	42.041	MGP_C57BL6NJ_G0030541	Dhx37	64	42.041
MGP_C57BL6NJ_G0019287	Dhx40	99	34.728	MGP_C57BL6NJ_G0029974	Dhx15	79	43.103
MGP_C57BL6NJ_G0019287	Dhx40	99	32.766	MGP_C57BL6NJ_G0019012	Dhx33	89	37.348
MGP_C57BL6NJ_G0019287	Dhx40	97	40.088	MGP_C57BL6NJ_G0019602	Dhx8	53	43.645
MGP_C57BL6NJ_G0019287	Dhx40	84	40.429	MGP_C57BL6NJ_G0034599	Dhx38	54	38.549
MGP_C57BL6NJ_G0019287	Dhx40	58	31.417	MGP_C57BL6NJ_G0020532	Tdrd9	89	31.417
MGP_C57BL6NJ_G0019287	Dhx40	99	37.004	MGP_C57BL6NJ_G0024060	Dhx16	61	42.012