EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019298 (Gene tree)
Gene ID: -
Gene Symbol: Sept4
Alias: ARTS|Bh5|OTTMUSG00000001265|Pnutl2|cell division control-related protein 2b|septin H5
Full Name: septin 4
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 25985 bases
Position: chr11:91896981-91922965
Accession: 1270156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0031963	MMR_HSR1	PF01926.23	3.9e-07	1	1
MGP_C57BL6NJ_P0031968	MMR_HSR1	PF01926.23	6.9e-07	1	1
MGP_C57BL6NJ_P0031965	MMR_HSR1	PF01926.23	8e-07	1	1
MGP_C57BL6NJ_P0031962	MMR_HSR1	PF01926.23	1.2e-06	1	1
MGP_C57BL6NJ_P0031964	MMR_HSR1	PF01926.23	1.3e-06	1	1
MGP_C57BL6NJ_P0031956	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0031956	-	666	XM_006532496	MGP_C57BL6NJ_P0031956	213 (aa)	XP_006532559	P28661
MGP_C57BL6NJ_T0031957	-	900	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031961	-	1354	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031960	-	1449	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031967	-	2136	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031963	-	759	-	MGP_C57BL6NJ_P0031963	232 (aa)	-	-
MGP_C57BL6NJ_T0031965	-	1245	-	MGP_C57BL6NJ_P0031965	379 (aa)	-	-
MGP_C57BL6NJ_T0031962	-	1550	-	MGP_C57BL6NJ_P0031962	459 (aa)	-	-
MGP_C57BL6NJ_T0031968	-	878	-	MGP_C57BL6NJ_P0031968	280 (aa)	-	-
MGP_C57BL6NJ_T0031969	-	560	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031964	-	1726	-	MGP_C57BL6NJ_P0031964	478 (aa)	-	-
MGP_C57BL6NJ_T0031970	-	845	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031971	-	535	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031958	-	1884	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031959	-	1474	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0031966	-	1252	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0019298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019298	Sept4	85	45.000	MGP_C57BL6NJ_G0030188	Sept11	67	43.878
MGP_C57BL6NJ_G0019298	Sept4	93	60.185	MGP_C57BL6NJ_G0034987	Sept7	70	59.091
MGP_C57BL6NJ_G0019298	Sept4	93	68.837	MGP_C57BL6NJ_G0016739	Sept2	100	65.421
MGP_C57BL6NJ_G0019298	Sept4	94	66.514	MGP_C57BL6NJ_G0033520	Sept1	100	66.897
MGP_C57BL6NJ_G0019298	Sept4	91	41.509	MGP_C57BL6NJ_G0017649	Sept10	67	43.878
MGP_C57BL6NJ_G0019298	Sept4	87	43.842	MGP_C57BL6NJ_G0018690	Sept8	66	43.878
MGP_C57BL6NJ_G0019298	Sept4	92	43.256	MGP_C57BL6NJ_G0022895	Sept12	84	42.446
MGP_C57BL6NJ_G0019298	Sept4	92	50.467	MGP_C57BL6NJ_G0019838	Sept9	81	52.551
MGP_C57BL6NJ_G0019298	Sept4	94	83.028	MGP_C57BL6NJ_G0023031	Sept5	97	76.359
MGP_C57BL6NJ_G0019298	Sept4	89	43.062	MGP_C57BL6NJ_G0036134	Sept6	67	43.390
MGP_C57BL6NJ_G0019298	Sept4	93	49.537	MGP_C57BL6NJ_G0022549	Sept3	92	49.682