EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0019386 (Gene tree)
Gene ID: -
Gene Symbol: Igf2bp1
Alias: AL024068|AW549074|CRD-BP|Crdbp|D030026A21Rik|D11Moh40e|D11Moh45|IMP-1|Neilsen|Vickz1|ZBP-1|Zbp1|mir-3063
Full Name: insulin-like growth factor 2 mRNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 58321 bases
Position: chr11:101287957-101346277
Accession: 1890357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0032319	KH_1	PF00013.29	4.8e-56	1	4
MGP_C57BL6NJ_P0032319	KH_1	PF00013.29	4.8e-56	2	4
MGP_C57BL6NJ_P0032319	KH_1	PF00013.29	4.8e-56	3	4
MGP_C57BL6NJ_P0032319	KH_1	PF00013.29	4.8e-56	4	4
MGP_C57BL6NJ_P0032319	RRM_1	PF00076.22	2e-16	1	2
MGP_C57BL6NJ_P0032319	RRM_1	PF00076.22	2e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0032319	-	8377	-	MGP_C57BL6NJ_P0032319	577 (aa)	-	O88477
MGP_C57BL6NJ_T0032320	-	690	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0032322	-	599	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0032323	-	1108	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0032321	-	576	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019386	Igf2bp1	59	30.597	MGP_C57BL6NJ_G0035725	-	84	32.039
MGP_C57BL6NJ_G0019386	Igf2bp1	100	64.677	MGP_C57BL6NJ_G0023083	Igf2bp2	99	64.618
MGP_C57BL6NJ_G0019386	Igf2bp1	60	33.333	MGP_C57BL6NJ_G0017785	Pcbp3	66	33.582
MGP_C57BL6NJ_G0019386	Igf2bp1	100	72.727	MGP_C57BL6NJ_G0031157	Igf2bp3	100	72.727