EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019555 (Gene tree)
Gene ID: -
Gene Symbol: Dhx58
Alias: B430001I08Rik|D11Lgp2e|D11lgp2e|LPG2|Lgp2|RLR-3
Full Name: DEXH (Asp-Glu-X-His) box polypeptide 58
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 9410 bases
Position: chr11:106674820-106684229
Accession: 1931560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0032845	ResIII	PF04851.15	4.1e-22	1	1
MGP_C57BL6NJ_P0032845	RIG-I_C-RD	PF11648.8	3.1e-33	1	1
MGP_C57BL6NJ_P0032845	DEAD	PF00270.29	3.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0032849	-	440	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0032848	-	744	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0032845	-	2412	-	MGP_C57BL6NJ_P0032845	678 (aa)	-	Q99J87
MGP_C57BL6NJ_T0032847	-	529	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0032846	-	786	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0032850	-	982	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0019555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019555	Dhx58	97	32.468	MGP_C57BL6NJ_G0028552	Ddx58	72	35.010
MGP_C57BL6NJ_G0019555	Dhx58	99	41.274	MGP_C57BL6NJ_G0026190	Ifih1	73	41.274