EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019690 (Gene tree)
Gene ID: -
Gene Symbol: Ddx42
Alias: 1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 32723 bases
Position: chr11:112855919-112888641
Accession: 1919297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0033485	ResIII	PF04851.15	1.2e-06	1	1
MGP_C57BL6NJ_P0033485	DEAD	PF00270.29	3.1e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0033486	-	445	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0033485	-	4011	XM_006534281	MGP_C57BL6NJ_P0033485	929 (aa)	XP_006534344	Q810A7

Gene Model

Click here to download MGP_C57BL6NJ_G0019690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019690's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019690	Ddx42	50	36.270	MGP_C57BL6NJ_G0035558	Ddx43	74	36.270
MGP_C57BL6NJ_G0019690	Ddx42	59	38.172	MGP_C57BL6NJ_G0019705	Ddx5	88	43.137
MGP_C57BL6NJ_G0019690	Ddx42	51	32.075	MGP_C57BL6NJ_G0016945	Ddx59	74	32.075