EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019705 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 10600 bases
Position: chr11:113516131-113526730
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0033550	P68HR	PF08061.11	3.4e-33	1	2
MGP_C57BL6NJ_P0033550	P68HR	PF08061.11	3.4e-33	2	2
MGP_C57BL6NJ_P0033550	DEAD	PF00270.29	2.8e-47	1	1
MGP_C57BL6NJ_P0033557	DEAD	PF00270.29	1.5e-15	1	1
MGP_C57BL6NJ_P0033558	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0033554	-	496	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0033555	-	708	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0033556	-	810	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0033557	-	861	-	MGP_C57BL6NJ_P0033557	182 (aa)	-	-
MGP_C57BL6NJ_T0033550	-	3559	XM_006532135	MGP_C57BL6NJ_P0033550	615 (aa)	XP_006532198	B1ARB9
MGP_C57BL6NJ_T0033551	-	3593	-	MGP_C57BL6NJ_P0033551	406 (aa)	-	-
MGP_C57BL6NJ_T0033552	-	879	-	MGP_C57BL6NJ_P0033552	71 (aa)	-	-
MGP_C57BL6NJ_T0033553	-	589	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0033558	-	831	-	MGP_C57BL6NJ_P0033558	167 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0019705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019705	Ddx5	86	32.857	MGP_C57BL6NJ_G0016945	Ddx59	66	33.094
MGP_C57BL6NJ_G0019705	Ddx5	56	30.110	MGP_C57BL6NJ_G0030529	Ddx55	57	30.110
MGP_C57BL6NJ_G0019705	Ddx5	80	42.522	MGP_C57BL6NJ_G0017321	D1Pas1	74	38.247
MGP_C57BL6NJ_G0019705	Ddx5	71	37.457	MGP_C57BL6NJ_G0031854	Ddx47	81	37.168
MGP_C57BL6NJ_G0019705	Ddx5	81	38.235	MGP_C57BL6NJ_G0020986	Ddx41	64	39.163
MGP_C57BL6NJ_G0019705	Ddx5	72	33.110	MGP_C57BL6NJ_G0019870	Eif4a3	82	34.857
MGP_C57BL6NJ_G0019705	Ddx5	70	33.446	MGP_C57BL6NJ_G0017699	Ddx50	51	34.302
MGP_C57BL6NJ_G0019705	Ddx5	80	38.922	MGP_C57BL6NJ_G0021324	Ddx4	57	39.012
MGP_C57BL6NJ_G0019705	Ddx5	81	36.389	MGP_C57BL6NJ_G0022715	Ddx23	50	37.915
MGP_C57BL6NJ_G0019705	Ddx5	72	32.107	MGP_C57BL6NJ_G0031330	Gm5580	77	33.227
MGP_C57BL6NJ_G0019705	Ddx5	72	32.107	MGP_C57BL6NJ_G0031331	Gm8994	77	33.227
MGP_C57BL6NJ_G0019705	Ddx5	55	30.029	MGP_C57BL6NJ_G0024038	Ddx39b	77	30.029
MGP_C57BL6NJ_G0019705	Ddx5	89	45.040	MGP_C57BL6NJ_G0035558	Ddx43	68	44.519
MGP_C57BL6NJ_G0019705	Ddx5	76	34.062	MGP_C57BL6NJ_G0034195	Ddx49	78	34.359
MGP_C57BL6NJ_G0019705	Ddx5	93	83.598	MGP_C57BL6NJ_G0022487	Ddx17	91	69.320
MGP_C57BL6NJ_G0019705	Ddx5	52	34.737	MGP_C57BL6NJ_G0023094	Eif4a2	71	32.314
MGP_C57BL6NJ_G0019705	Ddx5	88	43.137	MGP_C57BL6NJ_G0019690	Ddx42	59	38.172
MGP_C57BL6NJ_G0019705	Ddx5	73	31.148	MGP_C57BL6NJ_G0035026	Ddx25	73	32.425
MGP_C57BL6NJ_G0019705	Ddx5	62	35.345	MGP_C57BL6NJ_G0019255	Ddx52	66	31.204
MGP_C57BL6NJ_G0019705	Ddx5	71	30.861	MGP_C57BL6NJ_G0025950	Ddx31	56	31.313
MGP_C57BL6NJ_G0019705	Ddx5	80	42.522	MGP_C57BL6NJ_G0036071	Ddx3x	74	39.880
MGP_C57BL6NJ_G0019705	Ddx5	78	31.498	MGP_C57BL6NJ_G0018937	Eif4a1	81	33.154