EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019746 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf4l
Alias: 0610010C04Rik|1500000C01Rik|D11Ertd636e
Full Name: cleavage and polyadenylation specific factor 4-like
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 13061 bases
Position: chr11:121053271-121066331
Accession: 1277182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0033742	zf-CCCH	PF00642.24	1.6e-08	1	1
MGP_C57BL6NJ_P0033740	zf-CCCH	PF00642.24	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0033741	-	1375	-	MGP_C57BL6NJ_P0033741	280 (aa)	-	-
MGP_C57BL6NJ_T0033740	-	1213	-	MGP_C57BL6NJ_P0033740	228 (aa)	-	-
MGP_C57BL6NJ_T0033743	-	997	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0033742	-	1123	-	MGP_C57BL6NJ_P0033742	153 (aa)	-	-
MGP_C57BL6NJ_T0033739	-	1235	XM_006533700	MGP_C57BL6NJ_P0033739	190 (aa)	XP_006533764	A2A6P9

Gene Model

Click here to download MGP_C57BL6NJ_G0019746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019746	Cpsf4l	82	62.400	MGP_C57BL6NJ_G0030791	Cpsf4	86	52.358