EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019838 (Gene tree)
Gene ID: -
Gene Symbol: Sept9
Alias: Kiaa0991|MSF1|Msf|PNUTL4|SL3-3 integration site 1|Sint1
Full Name: septin 9
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 186823 bases
Position: chr11:125128960-125315782
Accession: 1858222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0034222	MMR_HSR1	PF01926.23	1.3e-09	1	1
MGP_C57BL6NJ_P0034219	MMR_HSR1	PF01926.23	5.9e-09	1	1
MGP_C57BL6NJ_P0034220	MMR_HSR1	PF01926.23	6.1e-09	1	1
MGP_C57BL6NJ_P0034218	MMR_HSR1	PF01926.23	6.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0034224	-	647	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0034225	-	555	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0034218	-	3616	XM_006533744	MGP_C57BL6NJ_P0034218	583 (aa)	XP_006533807	Q80UG5
MGP_C57BL6NJ_T0034219	-	3869	-	MGP_C57BL6NJ_P0034219	565 (aa)	-	-
MGP_C57BL6NJ_T0034223	-	4863	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0034222	-	778	-	MGP_C57BL6NJ_P0034222	242 (aa)	-	-
MGP_C57BL6NJ_T0034221	-	374	-	MGP_C57BL6NJ_P0034221	74 (aa)	-	-
MGP_C57BL6NJ_T0034220	-	3496	-	MGP_C57BL6NJ_P0034220	576 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0019838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019838	Sept9	81	51.269	MGP_C57BL6NJ_G0034987	Sept7	68	49.502
MGP_C57BL6NJ_G0019838	Sept9	81	52.551	MGP_C57BL6NJ_G0019298	Sept4	92	50.467
MGP_C57BL6NJ_G0019838	Sept9	83	46.000	MGP_C57BL6NJ_G0033520	Sept1	100	50.000
MGP_C57BL6NJ_G0019838	Sept9	81	44.949	MGP_C57BL6NJ_G0017649	Sept10	67	43.836
MGP_C57BL6NJ_G0019838	Sept9	88	49.767	MGP_C57BL6NJ_G0016739	Sept2	100	49.778
MGP_C57BL6NJ_G0019838	Sept9	82	64.322	MGP_C57BL6NJ_G0022895	Sept12	78	65.462
MGP_C57BL6NJ_G0019838	Sept9	82	75.377	MGP_C57BL6NJ_G0022549	Sept3	87	73.720
MGP_C57BL6NJ_G0019838	Sept9	81	46.970	MGP_C57BL6NJ_G0036134	Sept6	99	36.552
MGP_C57BL6NJ_G0019838	Sept9	81	46.970	MGP_C57BL6NJ_G0030188	Sept11	67	42.953
MGP_C57BL6NJ_G0019838	Sept9	81	45.455	MGP_C57BL6NJ_G0018690	Sept8	68	42.000
MGP_C57BL6NJ_G0019838	Sept9	88	49.057	MGP_C57BL6NJ_G0023031	Sept5	85	45.860