EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0019840 (Gene tree)
Gene ID
-
Gene Symbol
Tnrc6c
Alias
9930033H14Rik|mKIAA1582
Full Name
trinucleotide repeat containing 6C
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Plus strand
Length
125289 bases
Position
chr11:125639173-125764461
Accession
2443265
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0034227Ago_hookPF10427.91.4e-2311
MGP_C57BL6NJ_P0034229Ago_hookPF10427.91.4e-2311
MGP_C57BL6NJ_P0034230Ago_hookPF10427.91.6e-2311
MGP_C57BL6NJ_P0034230RRM_1PF00076.220.0004211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0034230-6611-MGP_C57BL6NJ_P00342301732 (aa)--
MGP_C57BL6NJ_T0034229-8846-MGP_C57BL6NJ_P00342291900 (aa)--
MGP_C57BL6NJ_T0034228-11589--- (aa)--
MGP_C57BL6NJ_T0034227-8723XM_006533109MGP_C57BL6NJ_P00342271900 (aa)XP_006533172B1ATC3
MGP_C57BL6NJ_T0034231-742--- (aa)--
MGP_C57BL6NJ_T0034232-1829--- (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0019840's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019840's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0019840Tnrc6c9940.570MGP_C57BL6NJ_G0033453Tnrc6a9844.482
MGP_C57BL6NJ_G0019840Tnrc6c9936.270MGP_C57BL6NJ_G0022513Tnrc6b9637.333

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