EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0019862 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Minus strand
Length
440249 bases
Position
chr11:126577557-127017805
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0034325Fox-1_CPF12414.82.3e-4511
MGP_C57BL6NJ_P0034328Fox-1_CPF12414.82.3e-4511
MGP_C57BL6NJ_P0034329Fox-1_CPF12414.82.3e-4511
MGP_C57BL6NJ_P0034327Fox-1_CPF12414.82.4e-4111
MGP_C57BL6NJ_P0034326Fox-1_CPF12414.82.6e-4111
MGP_C57BL6NJ_P0034324Fox-1_CPF12414.82.9e-4111
MGP_C57BL6NJ_P0034330Fox-1_CPF12414.81.6e-2111
MGP_C57BL6NJ_P0034331RRM_1PF00076.223.2e-1911
MGP_C57BL6NJ_P0034325RRM_1PF00076.221.5e-1811
MGP_C57BL6NJ_P0034328RRM_1PF00076.221.5e-1811
MGP_C57BL6NJ_P0034329RRM_1PF00076.221.7e-1811
MGP_C57BL6NJ_P0034324RRM_1PF00076.221.9e-1811
MGP_C57BL6NJ_P0034326RRM_1PF00076.222.1e-1811
MGP_C57BL6NJ_P0034330RRM_1PF00076.221.9e-1411
MGP_C57BL6NJ_P0034327RRM_1PF00076.220.000311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0034331-900-MGP_C57BL6NJ_P0034331169 (aa)--
MGP_C57BL6NJ_T0034330-710-MGP_C57BL6NJ_P0034330145 (aa)--
MGP_C57BL6NJ_T0034333-369--- (aa)--
MGP_C57BL6NJ_T0034332-301--- (aa)--
MGP_C57BL6NJ_T0034326-3150-MGP_C57BL6NJ_P0034326374 (aa)--
MGP_C57BL6NJ_T0034327-1553-MGP_C57BL6NJ_P0034327329 (aa)--
MGP_C57BL6NJ_T0034324-3084XM_006533722MGP_C57BL6NJ_P0034324360 (aa)XP_006533785Q8BIF2
MGP_C57BL6NJ_T0034325-2809-MGP_C57BL6NJ_P0034325313 (aa)--
MGP_C57BL6NJ_T0034328-1542-MGP_C57BL6NJ_P0034328313 (aa)--
MGP_C57BL6NJ_T0034329-2150-MGP_C57BL6NJ_P0034329327 (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0019862's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019862's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0019862Rbfox35331.868MGP_C57BL6NJ_G0033576Tial18131.111
MGP_C57BL6NJ_G0019862Rbfox39961.932MGP_C57BL6NJ_G0022428Rbfox29161.972
MGP_C57BL6NJ_G0019862Rbfox37231.429MGP_C57BL6NJ_G0016426Boll5043.939
MGP_C57BL6NJ_G0019862Rbfox310071.930MGP_C57BL6NJ_G0022906Rbfox19165.123

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