EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0034363	DEAD	PF00270.29	1.6e-41	1	1
MGP_C57BL6NJ_P0034367	DEAD	PF00270.29	3e-30	1	2
MGP_C57BL6NJ_P0034367	DEAD	PF00270.29	3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0034368	-	377	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0034366	-	473	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0034367	-	916	-	MGP_C57BL6NJ_P0034367	299 (aa)	-	-
MGP_C57BL6NJ_T0034364	-	613	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0034365	-	466	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0034363	-	1509	-	MGP_C57BL6NJ_P0034363	411 (aa)	-	Q91VC3

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019870	Eif4a3	89	37.197	MGP_C57BL6NJ_G0034335	Ddx39	86	37.197
MGP_C57BL6NJ_G0019870	Eif4a3	99	61.327	MGP_C57BL6NJ_G0018937	Eif4a1	100	61.785
MGP_C57BL6NJ_G0019870	Eif4a3	90	34.321	MGP_C57BL6NJ_G0036071	Ddx3x	61	34.321
MGP_C57BL6NJ_G0019870	Eif4a3	91	32.190	MGP_C57BL6NJ_G0034195	Ddx49	79	32.190
MGP_C57BL6NJ_G0019870	Eif4a3	94	32.041	MGP_C57BL6NJ_G0031854	Ddx47	96	30.749
MGP_C57BL6NJ_G0019870	Eif4a3	92	60.317	MGP_C57BL6NJ_G0023094	Eif4a2	92	60.317
MGP_C57BL6NJ_G0019870	Eif4a3	90	30.691	MGP_C57BL6NJ_G0021324	Ddx4	56	30.691
MGP_C57BL6NJ_G0019870	Eif4a3	100	32.822	MGP_C57BL6NJ_G0035026	Ddx25	77	38.298
MGP_C57BL6NJ_G0019870	Eif4a3	84	31.831	MGP_C57BL6NJ_G0035558	Ddx43	54	31.831
MGP_C57BL6NJ_G0019870	Eif4a3	82	34.857	MGP_C57BL6NJ_G0019705	Ddx5	72	33.110
MGP_C57BL6NJ_G0019870	Eif4a3	100	90.312	MGP_C57BL6NJ_G0031331	Gm8994	100	96.617
MGP_C57BL6NJ_G0019870	Eif4a3	100	90.312	MGP_C57BL6NJ_G0031330	Gm5580	91	96.901
MGP_C57BL6NJ_G0019870	Eif4a3	82	35.277	MGP_C57BL6NJ_G0022487	Ddx17	53	35.277
MGP_C57BL6NJ_G0019870	Eif4a3	89	37.135	MGP_C57BL6NJ_G0034625	Ddx19a	78	37.135
MGP_C57BL6NJ_G0019870	Eif4a3	89	37.113	MGP_C57BL6NJ_G0034626	Ddx19b	78	37.113
MGP_C57BL6NJ_G0019870	Eif4a3	90	34.577	MGP_C57BL6NJ_G0017321	D1Pas1	61	34.577
MGP_C57BL6NJ_G0019870	Eif4a3	86	33.154	MGP_C57BL6NJ_G0020986	Ddx41	59	33.154
MGP_C57BL6NJ_G0019870	Eif4a3	86	33.520	MGP_C57BL6NJ_G0016945	Ddx59	58	33.520
MGP_C57BL6NJ_G0019870	Eif4a3	86	32.353	MGP_C57BL6NJ_G0017699	Ddx50	55	32.353
MGP_C57BL6NJ_G0019870	Eif4a3	88	38.356	MGP_C57BL6NJ_G0024038	Ddx39b	99	37.415