EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0019954 (Gene tree)
Gene ID: -
Gene Symbol: Dnajc27
Alias: AI639580|C330021A05Rik|Rabj|Rbj
Full Name: DnaJ heat shock protein family (Hsp40) member C27
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 30030 bases
Position: chr12:960282-990311
Accession: 2443036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0034790	MMR_HSR1	PF01926.23	3.8e-05	1	1
MGP_C57BL6NJ_P0034791	MMR_HSR1	PF01926.23	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0034791	-	2934	-	MGP_C57BL6NJ_P0034791	273 (aa)	-	-
MGP_C57BL6NJ_T0034790	-	4713	XM_006515052	MGP_C57BL6NJ_P0034790	273 (aa)	XP_006515115	Q8CFP6

Gene Model

Click here to download MGP_C57BL6NJ_G0019954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0019954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0019954	Dnajc27	58	32.278	MGP_C57BL6NJ_G0021694	Rab2b	78	32.692
MGP_C57BL6NJ_G0019954	Dnajc27	60	36.145	MGP_C57BL6NJ_G0031441	Rab7	94	35.870
MGP_C57BL6NJ_G0019954	Dnajc27	70	30.693	MGP_C57BL6NJ_G0026068	Rab14	92	31.250
MGP_C57BL6NJ_G0019954	Dnajc27	60	30.909	MGP_C57BL6NJ_G0016293	Rab23	66	30.909
MGP_C57BL6NJ_G0019954	Dnajc27	60	32.927	MGP_C57BL6NJ_G0028452	Rab2a	75	32.927
MGP_C57BL6NJ_G0019954	Dnajc27	64	30.286	MGP_C57BL6NJ_G0036361	Rab39b	80	30.286
MGP_C57BL6NJ_G0019954	Dnajc27	56	33.117	MGP_C57BL6NJ_G0036192	Rab33a	63	33.117
MGP_C57BL6NJ_G0019954	Dnajc27	60	30.303	MGP_C57BL6NJ_G0035435	Rab11a	74	30.303
MGP_C57BL6NJ_G0019954	Dnajc27	66	30.220	MGP_C57BL6NJ_G0019764	Rab37	80	30.220
MGP_C57BL6NJ_G0019954	Dnajc27	58	31.447	MGP_C57BL6NJ_G0027382	Rab22a	79	31.447
MGP_C57BL6NJ_G0019954	Dnajc27	63	33.714	MGP_C57BL6NJ_G0024384	Rab31	87	33.714
MGP_C57BL6NJ_G0019954	Dnajc27	60	31.325	MGP_C57BL6NJ_G0036600	Rab9b	82	31.325
MGP_C57BL6NJ_G0019954	Dnajc27	61	34.731	MGP_C57BL6NJ_G0024539	Rab18	79	34.731